RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 LGALS4P56470 323 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 GPR50Q13585 617 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 TPBGQ13641 420 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 MED22Q15528 200 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 SSX2Q16385 188 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 SLC22A6Q4U2R8 563 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 ACSM3Q53FZ2 586 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 PLA1AQ53H76 456 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 GLIPR1L1Q6UWM5 242 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 LIAT1Q6ZQX7 453 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 PRSS48Q7RTY5 328 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 GAPTQ8N292 157 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 JAGN1Q8N5M9 183 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 MS4A15Q8N5U1 240 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 Q96M66 194 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 GFI1Q99684 422 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 CALYQ9NYX4 217 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 TPRKBQ9Y3C4 175 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 RNF114Q9Y508 228 aa14□□□□□ -0.17
HSPG2-204ENST00000412328 MEGF8Q7Z7M0 2845 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A22PA8MWA6 464 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 LY6LH3BQJ8 138 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 IL1AP01583 271 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 RAB13P51153 203 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 TBCEQ15813 527 aaPredicted RBP13.99□□□□□ -0.17
HSPG2-204ENST00000412328 HLA-DRB5Q30154 266 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 LIPKQ5VXJ0 399 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 SIGIRRQ6IA17 410 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 SLC35E4Q6ICL7 350 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 TMEM91Q6ZNR0 172 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 RTN4RL2Q86UN3 420 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 ABHD12Q8N2K0 398 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 PHYHIPQ92561 330 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 UQCC2Q9BRT2 126 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 TMED9Q9BVK6 235 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 RANBP3Q9H6Z4 567 aaPredicted RBP13.99□□□□□ -0.17
HSPG2-204ENST00000412328 ISYNA1Q9NPH2 558 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 RAB26Q9ULW5 256 aa13.99□□□□□ -0.17
HSPG2-204ENST00000412328 MEIKINA0A087WXM9 373 aa13.98□□□□□ -0.17
HSPG2-204ENST00000412328 TRAV39A0A0B4J263 110 aa13.98□□□□□ -0.17
HSPG2-204ENST00000412328 CSTBP04080 98 aaKnown RBP13.98□□□□□ -0.17
HSPG2-204ENST00000412328 GTF2F2P13984 249 aa13.98□□□□□ -0.17
HSPG2-204ENST00000412328 MAP2K4P45985 399 aa13.98□□□□□ -0.17
HSPG2-204ENST00000412328 EFNB2P52799 333 aa13.98□□□□□ -0.17
HSPG2-204ENST00000412328 RPS25P62851 125 aaKnown RBP13.98□□□□□ -0.17
HSPG2-204ENST00000412328 DYNC1I2Q13409 638 aaKnown RBP13.98□□□□□ -0.17
HSPG2-204ENST00000412328 FAM189A2Q15884 450 aa13.98□□□□□ -0.17
HSPG2-204ENST00000412328 C1orf100Q5SVJ3 147 aa13.98□□□□□ -0.17
HSPG2-204ENST00000412328 AWAT2Q6E213 333 aa13.98□□□□□ -0.17
HSPG2-204ENST00000412328 OR52W1Q6IF63 320 aa13.98□□□□□ -0.17
HSPG2-204ENST00000412328 MRPS24Q96EL2 167 aaKnown RBP13.98□□□□□ -0.17
HSPG2-204ENST00000412328 CNBD2Q96M20 576 aa13.98□□□□□ -0.17
HSPG2-204ENST00000412328 ZNF702PQ9H963 129 aa13.98□□□□□ -0.17
HSPG2-204ENST00000412328 FBLN5Q9UBX5 448 aa13.98□□□□□ -0.17
HSPG2-204ENST00000412328 C15orf65H3BRN8 121 aa13.97□□□□□ -0.17
HSPG2-204ENST00000412328 MGMTP16455 207 aa13.97□□□□□ -0.17
HSPG2-204ENST00000412328 CPEP16870 476 aa13.97□□□□□ -0.17
HSPG2-204ENST00000412328 HTR1DP28221 377 aa13.97□□□□□ -0.17
HSPG2-204ENST00000412328 MLLT11Q13015 90 aaPredicted RBP13.97□□□□□ -0.17
HSPG2-204ENST00000412328 GPR176Q14439 515 aa13.97□□□□□ -0.17
HSPG2-204ENST00000412328 RBM48Q5RL73 367 aaKnown RBP13.97□□□□□ -0.17
HSPG2-204ENST00000412328 BRICD5Q6PL45 260 aa13.97□□□□□ -0.17
HSPG2-204ENST00000412328 ZNF497Q6ZNH5 498 aa13.97□□□□□ -0.17
HSPG2-204ENST00000412328 Q8N2B8 174 aa13.97□□□□□ -0.17
HSPG2-204ENST00000412328 MRGPRDQ8TDS7 321 aa13.97□□□□□ -0.17
HSPG2-204ENST00000412328 UFD1Q92890 307 aa13.97□□□□□ -0.17
HSPG2-204ENST00000412328 SIGLEC9Q9Y336 463 aa13.97□□□□□ -0.17
HSPG2-204ENST00000412328 HILPDAQ9Y5L2 63 aa13.97□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A10PA6NDY2 464 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A18PA6NE21 464 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A16PA6NEW6 464 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A20PA6NIJ5 464 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A7PA6NKC0 464 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A12PA8MX19 464 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A5PA8MXJ8 464 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A23PA8MXZ1 464 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 BUB1B-PAK6H3BSN5 160 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A15PP0C7V4 464 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A13PP0C7W8 464 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A14PP0C7W9 464 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 FAM90A24PP0C7X0 464 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 VHLP40337 213 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 KIR2DS4P43632 304 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 QRFPP83859 136 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 UNC119Q13432 240 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 SSX1Q16384 188 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 TMEM219Q86XT9 240 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 ZNF596Q8TC21 504 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 WIPF2Q8TF74 440 aaPredicted RBP13.96□□□□□ -0.17
HSPG2-204ENST00000412328 S100A13Q99584 98 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 BARHL1Q9BZE3 327 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 KCNK15Q9H427 330 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 BANF2Q9H503 90 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 IDI2-AS1Q9NZ38 188 aa13.96□□□□□ -0.17
HSPG2-204ENST00000412328 TMEM30CPA0ZSE6 113 aa13.95□□□□□ -0.18
HSPG2-204ENST00000412328 SLC22A1O15245 554 aa13.95□□□□□ -0.18
HSPG2-204ENST00000412328 VSIG8P0DPA2 414 aa13.95□□□□□ -0.18
HSPG2-204ENST00000412328 TPTE2P1Q5T6R2 138 aa13.95□□□□□ -0.18
HSPG2-204ENST00000412328 OR10A7Q8NGE5 316 aa13.95□□□□□ -0.18
HSPG2-204ENST00000412328 NDNFQ8TB73 568 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 207.1 ms