RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 COMPP49747 757 aaPredicted RBP13.25□□□□□ -0.29
NOD1-202ENST00000411552 DYNC1I2Q13409 638 aaKnown RBP13.25□□□□□ -0.29
NOD1-202ENST00000411552 KCTD21Q4G0X4 260 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 ZNF626Q68DY1 528 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 SLC35E4Q6ICL7 350 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 OR10K2Q6IF99 312 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 CD200R1LQ6Q8B3 271 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 OR6M1Q8NGM8 313 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 CLEC7AQ9BXN2 247 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 KCNK15Q9H427 330 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 SPACA1Q9HBV2 294 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 TRAV39A0A0B4J263 110 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 KBTBD11-OT1A0A1B0GTJ5 212 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM172BPA6NC97 362 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A10PA6NDY2 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A18PA6NE21 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A16PA6NEW6 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A20PA6NIJ5 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A8PA6NJQ4 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A7PA6NKC0 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A22PA8MWA6 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A12PA8MX19 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A5PA8MXJ8 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A23PA8MXZ1 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 RRP9O43818 475 aaKnown RBP13.24□□□□□ -0.29
NOD1-202ENST00000411552 MPIG6BO95866 241 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A15PP0C7V4 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A13PP0C7W8 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A14PP0C7W9 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 FAM90A24PP0C7X0 464 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 VSIG8P0DPA2 414 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 P2RY14Q15391 338 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 LDLRAD2Q5SZI1 272 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 SIGIRRQ6IA17 410 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 OR52W1Q6IF63 320 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 RAB12Q6IQ22 244 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 DYNAPQ8N1N2 210 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 ZNF565Q8N9K5 539 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 MRGPRDQ8TDS7 321 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 NEK7Q8TDX7 302 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 MEGF9Q9H1U4 602 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 PLGRKTQ9HBL7 147 aa13.24□□□□□ -0.29
NOD1-202ENST00000411552 TBL2Q9Y4P3 447 aaKnown RBP13.24□□□□□ -0.29
NOD1-202ENST00000411552 TRDV1A0A1B0GX56 115 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 TMEM30CPA0ZSE6 113 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 BTBD17A6NE02 478 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 MCRIP1C9JLW8 97 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 SLC17A2O00624 439 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 GPR137BO60478 399 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 BPNT1O95861 308 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 QRFPP83859 136 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 UNC119Q13432 240 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 C12orf54Q6X4T0 127 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 ZNF497Q6ZNH5 498 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 ABHD12Q8N2K0 398 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 KCNG3Q8TAE7 436 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 DYRK2Q92630 601 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 CYYR1Q96J86 154 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 SSX3Q99909 188 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 LINC00574Q9H8X3 128 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 CALYQ9NYX4 217 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 VPREB3Q9UKI3 123 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 PEX16Q9Y5Y5 336 aa13.23□□□□□ -0.29
NOD1-202ENST00000411552 TRAV1-2A0A0B4J238 106 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 SHISA3A0PJX4 238 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 TMEM14DPA8MWL7 114 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 H3BUX3 64 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 IL1AP01583 271 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 MT-ND4P03905 459 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 FUT3P21217 361 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 GALP22466 123 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 SSTR5P35346 364 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 RPS27AP62979 156 aaKnown RBP13.22□□□□□ -0.29
NOD1-202ENST00000411552 RBM39Q14498 530 aaKnown RBP13.22□□□□□ -0.29
NOD1-202ENST00000411552 RAB11BQ15907 218 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 LRRC75BQ2VPJ9 315 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 AWAT1Q58HT5 328 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 UTF1Q5T230 341 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 OR5R1Q8NH85 324 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 KIRREL1Q96J84 757 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 TMEM59Q9BXS4 323 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 ZNF286AQ9HBT8 521 aa13.22□□□□□ -0.29
NOD1-202ENST00000411552 A0A087X0M5 115 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 A0A1B0GX30 115 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 NPIPB11E5RHQ5 1161 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 AIPO00170 330 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 PDCD6O75340 191 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 CRYBA1P05813 215 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 ARSBP15848 533 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 NFYBP25208 207 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 CD34P28906 385 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 RPL15P61313 204 aaKnown RBP13.21□□□□□ -0.29
NOD1-202ENST00000411552 FOXL1Q12952 345 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 NEDD8Q15843 81 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 SSX2Q16385 188 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 AANATQ16613 207 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 PLA1AQ53H76 456 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 MINOS1Q5TGZ0 78 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 C22orf42Q6IC83 251 aa13.21□□□□□ -0.29
NOD1-202ENST00000411552 RTN4RL2Q86UN3 420 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms