RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 NUFIP1Q9UHK0 495 aaKnown RBP3.52□□□□□ -1.85
LSM5-206ENST00000409987 KCPQ6ZWJ8 1503 aa3.52□□□□□ -1.85
LSM5-206ENST00000409987 IGHV6-1A0A0B4J1U7 121 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 METTL15A6NJ78 407 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 SPAG7O75391 227 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 DHRS3O75911 302 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 AKR1C4P17516 323 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 RCVRNP35243 200 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 OMPP47874 163 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 SERPINB9P50453 376 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 GFERP55789 205 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 ARG2P78540 354 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 CRADDP78560 199 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 PDK2Q15119 407 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 IRF4Q15306 451 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 SNCBQ16143 134 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 TMEM183BQ1AE95 376 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 FBXL19-AS1Q494R0 122 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 FAM162BQ5T6X4 162 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 XKRXQ6PP77 449 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 OPN5Q6U736 354 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 NCCRP1Q6ZVX7 275 aaPredicted RBP3.51□□□□□ -1.85
LSM5-206ENST00000409987 TMEM183AQ8IXX5 376 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 STK40Q8N2I9 435 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 SLC26A10Q8NG04 563 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 OR1M1Q8NGA1 313 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 OR4P4Q8NGL7 312 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 ERMNQ8TAM6 284 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 MRPL48Q96GC5 212 aaKnown RBP3.51□□□□□ -1.85
LSM5-206ENST00000409987 SMIM8Q96KF7 97 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 OR2M2Q96R28 347 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 OR51E2Q9H255 320 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 OR51B6Q9H340 312 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.51□□□□□ -1.85
LSM5-206ENST00000409987 TOPAZ1Q8N9V7 1692 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 ALS2Q96Q42 1657 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 ANKARQ7Z5J8 1434 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 ANKRD50Q9ULJ7 1429 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 EYSQ5T1H1 3165 aa3.51□□□□□ -1.85
LSM5-206ENST00000409987 CACNA1AO00555 2505 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 PRUNE2Q8WUY3 3088 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 QSER1Q2KHR3 1735 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 NRCAMQ92823 1304 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 HTTP42858 3142 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 TRAV19A0A0A6YYK7 116 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 TRAV8-2A0A0B4J237 113 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 ZNF705GA8MUZ8 300 aaPredicted RBP3.5□□□□□ -1.85
LSM5-206ENST00000409987 KCNK1O00180 336 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 CCDC22O60826 627 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 PDCD6O75340 191 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 HIST1H1EP10412 219 aaKnown RBP3.5□□□□□ -1.85
LSM5-206ENST00000409987 PRPS1L1P21108 318 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 ADIGQ0VDE8 80 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 SRSF6Q13247 344 aaKnown RBP3.5□□□□□ -1.85
LSM5-206ENST00000409987 PNOCQ13519 176 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 DEFB115Q30KQ5 88 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 Q499Y3 187 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 ZNF658BQ4V348 819 aaPredicted RBP3.5□□□□□ -1.85
LSM5-206ENST00000409987 ATP6AP1LQ52LC2 224 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 TMEM255AQ5JRV8 349 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 TSPO2Q5TGU0 170 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 CEMP1Q6PRD7 247 aaPredicted RBP3.5□□□□□ -1.85
LSM5-206ENST00000409987 Q6ZSR6 202 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 OR4C13Q8NGP0 309 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 ZNF420Q8TAQ5 688 aaPredicted RBP3.5□□□□□ -1.85
LSM5-206ENST00000409987 ENKURQ8TC29 256 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 C16orf78Q8WTQ4 265 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 ASB13Q8WXK3 278 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 CCL17Q92583 94 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 PTX4Q96A99 478 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 PPCDCQ96CD2 204 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 OPTNQ96CV9 577 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 DGCR14Q96DF8 476 aaKnown RBP3.5□□□□□ -1.85
LSM5-206ENST00000409987 FMC1Q96HJ9 113 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 CEP170P1Q96L14 293 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 SPACA5Q96QH8 159 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 DMAC2Q9NW81 257 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 ENPP4Q9Y6X5 453 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 DAPK1P53355 1430 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 TRPM3Q9HCF6 1732 aaPredicted RBP3.5□□□□□ -1.85
LSM5-206ENST00000409987 FMN2Q9NZ56 1722 aa3.5□□□□□ -1.85
LSM5-206ENST00000409987 LAMA2P24043 3122 aaKnown RBP3.49□□□□□ -1.85
LSM5-206ENST00000409987 LRRC37A3O60309 1634 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 KRBOX1C9JBD0 128 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 E5RI56 91 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 M0R1X1 148 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 KRT75O95678 551 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 HLA-DRAP01903 254 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 SPNP16150 400 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 ELK1P19419 428 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 RPL12P30050 165 aaKnown RBP3.49□□□□□ -1.85
LSM5-206ENST00000409987 PYCR1P32322 319 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 PRSS3P35030 304 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 CXCL5P42830 114 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 NMUP48645 174 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 ACOT2P49753 483 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 CCL23P55773 120 aa3.49□□□□□ -1.85
LSM5-206ENST00000409987 PPIDQ08752 370 aaKnown RBP3.49□□□□□ -1.85
LSM5-206ENST00000409987 SMAGPQ0VAQ4 97 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms