RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 EMP2P54851 167 aa1.03□□□□□ -2.24
PMS1-203ENST00000409593 PLTPP55058 493 aa1.03□□□□□ -2.24
PMS1-203ENST00000409593 OR2B6P58173 313 aa1.03□□□□□ -2.24
PMS1-203ENST00000409593 TSPAN31Q12999 210 aa1.03□□□□□ -2.24
PMS1-203ENST00000409593 LINC00523Q86TU6 105 aa1.03□□□□□ -2.24
PMS1-203ENST00000409593 SLC25A45Q8N413 288 aa1.03□□□□□ -2.24
PMS1-203ENST00000409593 GATD1Q8NB37 220 aa1.03□□□□□ -2.24
PMS1-203ENST00000409593 OR51L1Q8NGJ5 315 aa1.03□□□□□ -2.24
PMS1-203ENST00000409593 AGR3Q8TD06 166 aa1.03□□□□□ -2.24
PMS1-203ENST00000409593 PDCD6IPQ8WUM4 868 aaKnown RBP1.03□□□□□ -2.24
PMS1-203ENST00000409593 PEX13Q92968 403 aa1.03□□□□□ -2.24
PMS1-203ENST00000409593 SDHAF2Q9NX18 166 aa1.03□□□□□ -2.24
PMS1-203ENST00000409593 MINOS1-NBL1R4GNA1 71 aa1.03□□□□□ -2.24
PMS1-203ENST00000409593 COL4A2P08572 1712 aa1.02□□□□□ -2.25
PMS1-203ENST00000409593 NEURL4Q96JN8 1562 aa1.02□□□□□ -2.25
PMS1-203ENST00000409593 TOR1AO14656 332 aa1.02□□□□□ -2.25
PMS1-203ENST00000409593 TCF21O43680 179 aa1.02□□□□□ -2.25
PMS1-203ENST00000409593 SOX14O95416 240 aa1.02□□□□□ -2.25
PMS1-203ENST00000409593 GPX1P07203 203 aa1.02□□□□□ -2.25
PMS1-203ENST00000409593 WDR43Q15061 677 aaKnown RBP eCLIP1.02□□□□□ -2.25
PMS1-203ENST00000409593 OR8G1Q15617 311 aa1.02□□□□□ -2.25
PMS1-203ENST00000409593 ZNF563Q8TA94 476 aa1.02□□□□□ -2.25
PMS1-203ENST00000409593 SPPL2BQ8TCT7 592 aa1.02□□□□□ -2.25
PMS1-203ENST00000409593 DIABLOQ9NR28 239 aa1.02□□□□□ -2.25
PMS1-203ENST00000409593 POMPQ9Y244 141 aa1.02□□□□□ -2.25
PMS1-203ENST00000409593 AQRO60306 1485 aaKnown RBP eCLIP1.02□□□□□ -2.251e-9■■■■□ 22.4
PMS1-203ENST00000409593 WDR19Q8NEZ3 1342 aa1.02□□□□□ -2.25
PMS1-203ENST00000409593 TRPM3Q9HCF6 1732 aaPredicted RBP1.01□□□□□ -2.25
PMS1-203ENST00000409593 IGHV2-26A0A0B4J1V2 119 aa1.01□□□□□ -2.25
PMS1-203ENST00000409593 IGKV1D-43A0A0B4J1Z2 117 aa1.01□□□□□ -2.25
PMS1-203ENST00000409593 A8MWP6 167 aa1.01□□□□□ -2.25
PMS1-203ENST00000409593 PRMT5O14744 637 aaPredicted RBP1.01□□□□□ -2.25
PMS1-203ENST00000409593 STX4Q12846 297 aa1.01□□□□□ -2.25
PMS1-203ENST00000409593 HTR4Q13639 388 aa1.01□□□□□ -2.25
PMS1-203ENST00000409593 RESP18Q5W5W9 173 aa1.01□□□□□ -2.25
PMS1-203ENST00000409593 ASCL4Q6XD76 172 aa1.01□□□□□ -2.25
PMS1-203ENST00000409593 SELENOHQ8IZQ5 122 aaKnown RBP1.01□□□□□ -2.25
PMS1-203ENST00000409593 NELFBQ8WX92 580 aa1.01□□□□□ -2.25
PMS1-203ENST00000409593 HEY1Q9Y5J3 304 aa1.01□□□□□ -2.25
PMS1-203ENST00000409593 SLIT2O94813 1529 aa1.01□□□□□ -2.25
PMS1-203ENST00000409593 COL4A1P02462 1669 aa1.01□□□□□ -2.25
PMS1-203ENST00000409593 ATRNO75882 1429 aa1.01□□□□□ -2.25
PMS1-203ENST00000409593 A0A0G2JQZ4 141 aa1□□□□□ -2.25
PMS1-203ENST00000409593 CD8AP01732 235 aa1□□□□□ -2.25
PMS1-203ENST00000409593 SLC2A1P11166 492 aa1□□□□□ -2.25
PMS1-203ENST00000409593 GCLMP48507 274 aa1□□□□□ -2.25
PMS1-203ENST00000409593 TTPAP49638 278 aa1□□□□□ -2.25
PMS1-203ENST00000409593 SPAG1Q07617 926 aa1□□□□□ -2.25
PMS1-203ENST00000409593 SSX7Q7RTT5 188 aa1□□□□□ -2.25
PMS1-203ENST00000409593 OR52K2Q8NGK3 314 aa1□□□□□ -2.25
PMS1-203ENST00000409593 ALX4Q9H161 411 aaPredicted RBP1□□□□□ -2.25
PMS1-203ENST00000409593 CEP170Q5SW79 1584 aa1□□□□□ -2.25
PMS1-203ENST00000409593 NCKAP5O14513 1909 aa1□□□□□ -2.25
PMS1-203ENST00000409593 CRB1P82279 1406 aa1□□□□□ -2.25
PMS1-203ENST00000409593 PXDNLA1KZ92 1463 aa1□□□□□ -2.25
PMS1-203ENST00000409593 VPS37CA5D8V6 355 aaPredicted RBP1□□□□□ -2.25
PMS1-203ENST00000409593 GMDSO60547 372 aa1□□□□□ -2.25
PMS1-203ENST00000409593 MBP02144 154 aa1□□□□□ -2.25
PMS1-203ENST00000409593 IGKV5-2P06315 115 aa1□□□□□ -2.25
PMS1-203ENST00000409593 SRMP19623 302 aa1□□□□□ -2.25
PMS1-203ENST00000409593 DOC2AQ14183 400 aa1□□□□□ -2.25
PMS1-203ENST00000409593 GUSBP1Q15486 140 aa1□□□□□ -2.25
PMS1-203ENST00000409593 HSP90AA4PQ58FG1 418 aa1□□□□□ -2.25
PMS1-203ENST00000409593 ZIC4Q8N9L1 334 aa1□□□□□ -2.25
PMS1-203ENST00000409593 ERMNQ8TAM6 284 aa1□□□□□ -2.25
PMS1-203ENST00000409593 CACNG8Q8WXS5 425 aa1□□□□□ -2.25
PMS1-203ENST00000409593 BIRC8Q96P09 236 aa1□□□□□ -2.25
PMS1-203ENST00000409593 FBXL3Q9UKT7 428 aa1□□□□□ -2.25
PMS1-203ENST00000409593 WASHC3Q9Y3C0 194 aa1□□□□□ -2.25
PMS1-203ENST00000409593 ADAMTSL3P82987 1691 aa1□□□□□ -2.25
PMS1-203ENST00000409593 IGHV3OR15-7A0A075B7D8 119 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 MUC21A0A0G2JKD1 596 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 MUC21A0A140T8X8 626 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 CA2P00918 260 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 CRYGDP07320 174 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 ZNF3P17036 446 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 SPAM1P38567 509 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 CBX5P45973 191 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 RAB38P57729 211 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 KRTAP10-4P60372 401 aaPredicted RBP0.99□□□□□ -2.25
PMS1-203ENST00000409593 FAM229BQ4G0N7 80 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 OLIG3Q7RTU3 272 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 OR4A15Q8NGL6 344 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 OR4X1Q8NH49 305 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 CLDN23Q96B33 292 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 MRPL32Q9BYC8 188 aaKnown RBP0.99□□□□□ -2.25
PMS1-203ENST00000409593 POTEKPQ9BYX7 375 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 FBXO44Q9H4M3 255 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 ANKHQ9HCJ1 492 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 TTC41PQ6P2S7 1318 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 COL6A6A6NMZ7 2263 aa0.99□□□□□ -2.25
PMS1-203ENST00000409593 CASC3O15234 703 aaKnown RBP0.98□□□□□ -2.25
PMS1-203ENST00000409593 OR4A8P0C604 315 aa0.98□□□□□ -2.25
PMS1-203ENST00000409593 LYNX1P0DP58 116 aa0.98□□□□□ -2.25
PMS1-203ENST00000409593 PRKACAP17612 351 aa0.98□□□□□ -2.25
PMS1-203ENST00000409593 CPN2P22792 545 aa0.98□□□□□ -2.25
PMS1-203ENST00000409593 PYCR1P32322 319 aa0.98□□□□□ -2.25
PMS1-203ENST00000409593 RWDD2BP57060 319 aa0.98□□□□□ -2.25
PMS1-203ENST00000409593 VN1R4Q7Z5H5 301 aa0.98□□□□□ -2.25
PMS1-203ENST00000409593 OR8G5Q8NG78 346 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms