RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 SLC30A7Q8NEW0 376 aa12.99□□□□□ -0.33
SCAMP4-202ENST00000409472 DCHS1Q96JQ0 3298 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 TEX13DA0A0J9YY54 714 aaPredicted RBP12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 NSUN5P2Q63ZY6 315 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 DHRS11Q6UWP2 260 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 OR5L1Q8NGL2 311 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 RNF141Q8WVD5 230 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 RCC2Q9P258 522 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 ZNF705EA8MWA4 302 aaPredicted RBP12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 RHBDL1O75783 438 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 OR5AC1P0C628 307 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 ZNF728P0DKX0 622 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 AADACP22760 399 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 CA6P23280 308 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 APLNRP35414 380 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 Q8NFD4 153 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 C2orf50Q96LR7 162 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 GPHA2Q96T91 129 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 ZNF286AQ9HBT8 521 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 CYTL1Q9NRR1 136 aa12.98□□□□□ -0.33
SCAMP4-202ENST00000409472 IFNA10P01566 189 aa12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 NQO2P16083 231 aa12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 IGHV1-2P23083 117 aa12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 RBMXP38159 391 aaKnown RBP12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 FGF12P61328 243 aa12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 IAH1Q2TAA2 248 aaPredicted RBP12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 REC114Q7Z4M0 266 aa12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 DMRTC2Q8IXT2 367 aaPredicted RBP12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 OR5P3Q8WZ94 311 aa12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 PIK3IP1Q96FE7 263 aa12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 TRIB1Q96RU8 372 aa12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 NRIP2Q9BQI9 281 aa12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 GP6Q9HCN6 339 aa12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 SLC2A9Q9NRM0 540 aa12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 CLCF1Q9UBD9 225 aa12.97□□□□□ -0.33
SCAMP4-202ENST00000409472 IDH3GP51553 393 aaPredicted RBP12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 PJVKQ0ZLH3 352 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 ALKBH6Q3KRA9 238 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 PLEKHN1Q494U1 663 aaPredicted RBP12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 PRSS54Q6PEW0 395 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 SGPP2Q8IWX5 399 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 CEP250Q9BV73 2442 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 A0A1W2PPE3 182 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 SELEP16581 610 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 HERPUD1Q15011 391 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 GGNBP1Q5YKI7 109 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 P4HA3Q7Z4N8 544 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 WDR86Q86TI4 376 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 RTN4IP1Q8WWV3 396 aaPredicted RBP12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 TMEM100Q9NV29 134 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 C1orf123Q9NWV4 160 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 CBY1Q9Y3M2 126 aa12.96□□□□□ -0.33
SCAMP4-202ENST00000409472 CACNA1GO43497 2377 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 PPIHO43447 177 aaKnown RBP12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 SCTP09683 121 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 CD82P27701 267 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 SRSF3P84103 164 aaKnown RBP12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 CYCSP99999 105 aaKnown RBP12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 HOXA4Q00056 320 aaPredicted RBP12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 OR2A2Q6IF42 318 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 C20orf204Q6ZNR8 217 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 MOB3AQ96BX8 217 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 NAA60Q9H7X0 242 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 LHX6Q9UPM6 363 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 BSNQ9UPA5 3926 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 MUC6Q6W4X9 2439 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 DMXL2Q8TDJ6 3036 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 LYL1P12980 280 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 TPT1P13693 172 aaKnown RBP12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 NDUFB7P17568 137 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 S100A2P29034 98 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 TMEM187Q14656 261 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 DEFB109BQ30KR1 87 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 VWA1Q6PCB0 445 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 LYZL2Q7Z4W2 148 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 OR4A4PQ8NGN8 299 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 GMPPAQ96IJ6 420 aaPredicted RBP12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 CLCC1Q96S66 551 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 GVINP1Q7Z2Y8 2422 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 GTF3C1Q12789 2109 aa12.95□□□□□ -0.34
SCAMP4-202ENST00000409472 INTS1Q8N201 2190 aaKnown RBP12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 TRAPPC2LH3BP13 241 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 NAPSAO96009 420 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 IGHG3P01860 377 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 GLP1RP43220 463 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 ABCA11PQ4W5N1 156 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 TMEM211Q6ICI0 200 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 CNEP1R1Q8N9A8 125 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 MEGF10Q96KG7 1140 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 OR2J1Q9GZK6 312 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 TMEM231Q9H6L2 316 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 TUBA4BQ9H853 241 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 SPTBN2O15020 2390 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 IGKV1-6A0A0C4DH72 117 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 ANKRD30BLA7E2S9 258 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 SMPD2O60906 423 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 PPYP01298 95 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 ECI1P42126 302 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 F2RL1P55085 397 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 ZNF383Q8NA42 475 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms