RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SPACA5Q96QH8 159 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 ARL8BQ9NVJ2 186 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 TAGLN3Q9UI15 199 aa12.92□□□□□ -0.34
CHMP3-203ENST00000409225 MOSP00540 346 aa12.91□□□□□ -0.34
CHMP3-203ENST00000409225 OCM2P0CE71 109 aa12.91□□□□□ -0.34
CHMP3-203ENST00000409225 OCMP0CE72 109 aaPredicted RBP12.91□□□□□ -0.34
CHMP3-203ENST00000409225 OR5H8P0DN80 308 aa12.91□□□□□ -0.34
CHMP3-203ENST00000409225 HTR1FP30939 366 aa12.91□□□□□ -0.34
CHMP3-203ENST00000409225 SSTR5P35346 364 aa12.91□□□□□ -0.34
CHMP3-203ENST00000409225 SLURP1P55000 103 aa12.91□□□□□ -0.34
CHMP3-203ENST00000409225 ZP1P60852 638 aa12.91□□□□□ -0.34
CHMP3-203ENST00000409225 ISL1P61371 349 aa12.91□□□□□ -0.34
CHMP3-203ENST00000409225 PRSS35Q8N3Z0 413 aa12.91□□□□□ -0.34
CHMP3-203ENST00000409225 OR51T1Q8NGJ9 327 aa12.91□□□□□ -0.34
CHMP3-203ENST00000409225 ST6GALNAC6Q969X2 333 aa12.91□□□□□ -0.34
CHMP3-203ENST00000409225 ALX4Q9H161 411 aaPredicted RBP12.91□□□□□ -0.34
CHMP3-203ENST00000409225 ARGLU1Q9NWB6 273 aaPredicted RBP12.91□□□□□ -0.34
CHMP3-203ENST00000409225 NDE1Q9NXR1 346 aa12.91□□□□□ -0.34
CHMP3-203ENST00000409225 H2AFY2Q9P0M6 372 aaPredicted RBP12.91□□□□□ -0.34
CHMP3-203ENST00000409225 TRAV39A0A0B4J263 110 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 METTL15A6NJ78 407 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 NPIPB11E5RHQ5 1161 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 IGF1P05019 195 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 ZNF20P17024 532 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 MS4A2Q01362 244 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 CDK5R1Q15078 307 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 PAN3Q58A45 887 aaKnown RBP12.9□□□□□ -0.34
CHMP3-203ENST00000409225 FAM71E2Q8N5Q1 922 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 ARPC1AQ92747 370 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 FGGYQ96C11 551 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 SPATA25Q9BR10 227 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 GHITMQ9H3K2 345 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 LINC00574Q9H8X3 128 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 WSB1Q9Y6I7 421 aa12.9□□□□□ -0.34
CHMP3-203ENST00000409225 ZNF736B4DX44 427 aaPredicted RBP12.89□□□□□ -0.35
CHMP3-203ENST00000409225 G3V318 75 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 H0YJX3 145 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 UBCP0CG48 685 aaKnown RBP12.89□□□□□ -0.35
CHMP3-203ENST00000409225 ANXA8P13928 327 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 MYF6P23409 242 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 CD1BP29016 333 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 KIR3DL2P43630 455 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 CRISP1P54107 249 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 F2RL1P55085 397 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 SLC16A12Q6ZSM3 486 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 UTS2BQ765I0 119 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 HAPLN4Q86UW8 402 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 SPSB1Q96BD6 273 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 NR1H4Q96RI1 486 aaPredicted RBP12.89□□□□□ -0.35
CHMP3-203ENST00000409225 FAM107BQ9H098 131 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 C19orf73Q9NVV2 129 aa12.89□□□□□ -0.35
CHMP3-203ENST00000409225 ZNF107Q9UII5 783 aaPredicted RBP12.89□□□□□ -0.35
CHMP3-203ENST00000409225 A0A1W2PQL4 384 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-203ENST00000409225 MAGEA13PA6NCF6 341 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 SLC2A2P11168 524 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-203ENST00000409225 PPIFP30405 207 aaKnown RBP12.88□□□□□ -0.35
CHMP3-203ENST00000409225 MNAT1P51948 309 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 AADACL4Q5VUY2 407 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 ACSM6Q6P461 480 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 SGPP2Q8IWX5 399 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 Q8N1Y9 231 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 TMEM104Q8NE00 496 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 OR10A7Q8NGE5 316 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 OR8H1Q8NGG4 311 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 PLPPR1Q8TBJ4 325 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 RTN4IP1Q8WWV3 396 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-203ENST00000409225 BARHL1Q9BZE3 327 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 OR51J1Q9H342 316 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 NCOR1P1Q9H4R4 102 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 RHOFQ9HBH0 211 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 ZNF580Q9UK33 172 aa12.88□□□□□ -0.35
CHMP3-203ENST00000409225 FRAS1Q86XX4 4008 aa12.87□□□□□ -0.35
CHMP3-203ENST00000409225 TRAV24A0A0B4J272 114 aa12.87□□□□□ -0.35
CHMP3-203ENST00000409225 LINC01619G3V211 115 aa12.87□□□□□ -0.35
CHMP3-203ENST00000409225 APOL3O95236 402 aa12.87□□□□□ -0.35
CHMP3-203ENST00000409225 IFNA6P05013 189 aa12.87□□□□□ -0.35
CHMP3-203ENST00000409225 OR8U9P0C7N5 309 aa12.87□□□□□ -0.35
CHMP3-203ENST00000409225 RAB9AP51151 201 aa12.87□□□□□ -0.35
CHMP3-203ENST00000409225 TRIM25Q14258 630 aaKnown RBP12.87□□□□□ -0.35
CHMP3-203ENST00000409225 RSBN1Q5VWQ0 802 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-203ENST00000409225 NXNL2Q5VZ03 156 aa12.87□□□□□ -0.35
CHMP3-203ENST00000409225 LYPD6Q86Y78 171 aa12.87□□□□□ -0.35
CHMP3-203ENST00000409225 SAXO1Q8IYX7 474 aa12.87□□□□□ -0.35
CHMP3-203ENST00000409225 TCEANCQ8N8B7 351 aa12.87□□□□□ -0.35
CHMP3-203ENST00000409225 OR13C9Q8NGT0 318 aa12.87□□□□□ -0.35
CHMP3-203ENST00000409225 IGLV1-40P01703 118 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 TMEM225BP0DP42 221 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 IL3RAP26951 378 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 PTGES3Q15185 160 aaKnown RBP12.86□□□□□ -0.35
CHMP3-203ENST00000409225 HAGHQ16775 308 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 ADGRG5Q8IZF4 528 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 OR10H4Q8NGA5 316 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 UBALD1Q8TB05 177 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 CNIH3Q8TBE1 160 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 UTP4Q969X6 686 aaKnown RBP12.86□□□□□ -0.35
CHMP3-203ENST00000409225 LRGUKQ96M69 825 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 OR4C12Q96R67 309 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 CHCHD6Q9BRQ6 235 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 PRRG3Q9BZD7 231 aa12.86□□□□□ -0.35
CHMP3-203ENST00000409225 PARP11Q9NR21 331 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms