RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ZNF454Q8N9F8 522 aa10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 OR2T33Q8NG76 320 aa10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 C4orf3Q8WVX3 66 aa10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 BORCS5Q969J3 196 aa10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 CREB3L1Q96BA8 519 aa10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 TEAD3Q99594 435 aa10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 PKIBQ9C010 78 aa10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 FGF20Q9NP95 211 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 IL36RNQ9UBH0 155 aa10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 ERGIC3Q9Y282 383 aa10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 UBE2J1Q9Y385 318 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 A3GALT2U3KPV4 340 aa10.04□□□□□ -0.8
CHRNA1-203ENST00000409219 OOSP1A8MZH6 123 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 AIREO43918 545 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 DHRS3O75911 302 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 VBP1P61758 197 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 NCS1P62166 190 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 RAB40BQ12829 278 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 RBM39Q14498 530 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 PNLIPRP3Q17RR3 467 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 TIMM50Q3ZCQ8 353 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 CLVS2Q5SYC1 327 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 UTF1Q5T230 341 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 ASPHD1Q5U4P2 390 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 NANOGP1Q8N7R0 232 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 TRMT10AQ8TBZ6 339 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 RNFT2Q96EX2 444 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 MGLLQ99685 303 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 MND1Q9BWT6 205 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 PBOV1Q9GZY1 135 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 ISYNA1Q9NPH2 558 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 MTCH1Q9NZJ7 389 aa10.03□□□□□ -0.8
CHRNA1-203ENST00000409219 TMEM269A0A1B0GVZ9 245 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 HAND1O96004 215 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 SPNP16150 400 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 TMEM11P17152 192 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 GABRR1P24046 479 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 GADD45AP24522 165 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 P2RX3P56373 397 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 FOXE3Q13461 319 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 GPR50Q13585 617 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 HES1Q14469 280 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 AADACL4Q5VUY2 407 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 OR11H1Q8NG94 326 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 OR52I1Q8NGK6 324 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 RFKQ969G6 155 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 TOMM40LQ969M1 308 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 OTULINQ96BN8 352 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 CEP19Q96LK0 163 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 OR51V1Q9H2C8 321 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 GAL3ST2Q9H3Q3 398 aa10.02□□□□□ -0.81
CHRNA1-203ENST00000409219 A0A1W2PPI3 338 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 ACOD1A6NK06 481 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 AP4M1O00189 453 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 TOR1AO14656 332 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 MGST3O14880 152 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 LDLRAD4O15165 306 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 ELANEP08246 267 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 GP9P14770 177 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 ERP29P30040 261 aaKnown RBP10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 OR3A1P47881 315 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 MLLT11Q13015 90 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 HNF4GQ14541 408 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 SPHARQ15513 63 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 LHFPL2Q6ZUX7 228 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 BCDIN3DQ7Z5W3 292 aaKnown RBP10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 S100ZQ8WXG8 99 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 SLAMF9Q96A28 289 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 OPALINQ96PE5 141 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 JAM3Q9BX67 310 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 SLIRPQ9GZT3 109 aaKnown RBP10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 DCSTAMPQ9H295 470 aa10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 NUFIP1Q9UHK0 495 aaKnown RBP10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 EXOSC1Q9Y3B2 195 aaKnown RBP10.01□□□□□ -0.81
CHRNA1-203ENST00000409219 KMT2AQ03164 3969 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 A0A087X0M5 115 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 TRGV10A0A0A0MS01 117 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 A0A1B0GX30 115 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 A6NIN4 97 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 TTRP02766 147 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 LSM3P62310 102 aaKnown RBP10□□□□□ -0.81
CHRNA1-203ENST00000409219 MFGE8Q08431 387 aaPredicted RBP10□□□□□ -0.81
CHRNA1-203ENST00000409219 TMED1Q13445 227 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 MED22Q15528 200 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 SSX1Q16384 188 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 NXNL2Q5VZ03 156 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 ZNF429Q86V71 674 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 OR6Q1Q8NGQ2 317 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 EMG1Q92979 244 aaKnown RBP10□□□□□ -0.81
CHRNA1-203ENST00000409219 RPEQ96AT9 228 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 NXF2Q9GZY0 626 aaKnown RBP10□□□□□ -0.81
CHRNA1-203ENST00000409219 AKIP1Q9NQ31 210 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 PCDHB16Q9NRJ7 776 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 CCDC59Q9P031 241 aaKnown RBP10□□□□□ -0.81
CHRNA1-203ENST00000409219 CLEC2DQ9UHP7 191 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 SLC7A11Q9UPY5 501 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 EXOGQ9Y2C4 368 aaKnown RBP10□□□□□ -0.81
CHRNA1-203ENST00000409219 V9GYS6 101 aa10□□□□□ -0.81
CHRNA1-203ENST00000409219 IGKV1-27A0A075B6S5 117 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms