RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 PLA2G5P39877 138 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 HNRNPA3P51991 378 aaKnown RBP11.06□□□□□ -0.64
HERC3-203ENST00000407637 TMEM267Q0VDI3 215 aaPredicted RBP11.06□□□□□ -0.64
HERC3-203ENST00000407637 KISS1Q15726 138 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 SPATA45Q537H7 98 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 KCNIP4Q6PIL6 250 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 Q6ZN92 141 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 ZNF738Q8NE65 137 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 MBD3L1Q8WWY6 194 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 ANAPC16Q96DE5 110 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 ZFYVE21Q9BQ24 234 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 OR10A5Q9H207 317 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 ZNF286AQ9HBT8 521 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 SLC45A2Q9UMX9 530 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 WIPI2Q9Y4P8 454 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 EDDM13A0A1B0GTR0 161 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 PLPP3O14495 311 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 UTS2O95399 124 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 CEACAM5P06731 702 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 CISD3P0C7P0 127 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 AADACP22760 399 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 CTGFP29279 349 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 MEF2BQ02080 365 aaPredicted RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 CRIP3Q6Q6R5 217 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 MYPOPQ86VE0 399 aaPredicted RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 OR4B1Q8NGF8 309 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 SSC4DQ8WTU2 575 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 C11orf40Q8WZ69 217 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 WDYHV1Q96HA8 205 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 RBM24Q9BX46 236 aaKnown RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 PLK3Q9H4B4 646 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 TBX21Q9UL17 535 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 ARHGEF17Q96PE2 2063 aaPredicted RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 RANBP2P49792 3224 aaKnown RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 CIDEAO60543 219 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 DXOO77932 396 aaKnown RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 PDGFBP01127 241 aaPredicted RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 IFNA5P01569 189 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 HINT1P49773 126 aaPredicted RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 UBE2G2P60604 165 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 TESK1Q15569 626 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 UEVLDQ8IX04 471 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 SEPSECSQ9HD40 501 aaKnown RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 IGHV2-70DA0A0C4DH43 119 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 CHST1O43916 411 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 SERF1AO75920 110 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 IGHMP01871 453 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 EPHA8P29322 1005 aaPredicted RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 CTRLP40313 264 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 LDLRAD2Q5SZI1 272 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 DNM1P34Q6PK57 102 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 SAXO1Q8IYX7 474 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 PRR22Q8IZ63 422 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 LIN37Q96GY3 246 aaPredicted RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 REPIN1Q9BWE0 567 aaKnown RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 TM2D1Q9BX74 207 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 CSTL1Q9H114 145 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 PHPT1Q9NRX4 125 aaPredicted RBP11.05□□□□□ -0.64
HERC3-203ENST00000407637 TBC1D29Q9UFV1 150 aa11.05□□□□□ -0.64
HERC3-203ENST00000407637 C3orf85A0A1B0GTC6 90 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 PRR19A6NJB7 356 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 H0YIG0 161 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 MT-ATP6P00846 226 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 POU2F2P09086 479 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 HOXB2P14652 356 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 ZNF121P58317 390 aaPredicted RBP11.04□□□□□ -0.64
HERC3-203ENST00000407637 PPP1CBP62140 327 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 PAFAH1B2P68402 229 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 LCN2P80188 198 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 SHBQ15464 509 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 MRPL30Q8TCC3 161 aaKnown RBP11.04□□□□□ -0.64
HERC3-203ENST00000407637 BTF3L4Q96K17 158 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 MED29Q9NX70 200 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 UQCR10Q9UDW1 63 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 DUXBA0A1W2PPF3 345 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 HYPMO75409 117 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 SYNGR4O95473 234 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 MDH2P40926 338 aaKnown RBP11.04□□□□□ -0.64
HERC3-203ENST00000407637 ZNF77Q15935 545 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 ZNF695Q8IW36 515 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 MCEMP1Q8IX19 187 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 C12orf76Q8N812 135 aaPredicted RBP11.04□□□□□ -0.64
HERC3-203ENST00000407637 OR5AU1Q8NGC0 362 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 NAT6Q93015 286 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 DGAT2Q96PD7 388 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 SIGLEC12Q96PQ1 595 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 GPHA2Q96T91 129 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 SPIN2AQ99865 258 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 SPIN2BQ9BPZ2 258 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 FBXL7Q9UJT9 491 aa11.04□□□□□ -0.64
HERC3-203ENST00000407637 IGHV2OR16-5A0A0B4J2B6 119 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 HSBP1L1C9JCN9 74 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 NPIPA5E9PKD4 350 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 HMGB3O15347 200 aaKnown RBP11.03□□□□□ -0.64
HERC3-203ENST00000407637 HCRTR1O43613 425 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 KRTDAPP60985 99 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 RPL19P84098 196 aaKnown RBP11.03□□□□□ -0.64
HERC3-203ENST00000407637 ERASQ7Z444 233 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 CCDC71LQ8N9Z2 235 aa11.03□□□□□ -0.64
HERC3-203ENST00000407637 KCNE4Q8WWG9 221 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms