RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 SERPINA2P20848 420 aa15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 C21orf33P30042 268 aaPredicted RBP15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 CEACAM3P40198 252 aa15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 VDAC2P45880 294 aaPredicted RBP15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 RBM11P57052 281 aaKnown RBP15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 RIPK1Q13546 671 aa15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 LTC4SQ16873 150 aa15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 OSR2Q8N2R0 312 aa15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 OR9G1Q8NH87 305 aa15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 ZNF184Q99676 751 aaPredicted RBP15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 LINC00574Q9H8X3 128 aa15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 PNMA8CA0A1B0GUJ8 204 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 A0A1W2PP11 408 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 A0A1W2PPK0 400 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 G3V4G9 280 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 GEMIN2O14893 280 aaKnown RBP15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 OR7C1O76099 320 aaPredicted RBP15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 IL1AP01583 271 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 SSTR5P35346 364 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 PAX5Q02548 391 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 DOC2BQ14184 412 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 Q499Y3 187 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 YIF1BQ5BJH7 314 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 CREB3L1Q96BA8 519 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 SLC25A33Q9BSK2 321 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 MMP28Q9H239 520 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 LIN7BQ9HAP6 207 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 IDI2-AS1Q9NZ38 188 aa15.41■□□□□ 0.06
SMARCB1-204ENST00000407422 SH2D7A6NKC9 451 aaPredicted RBP15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 ADARB2-AS1A8MUL3 147 aa15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 NPIPB11E5RHQ5 1161 aa15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 H3BUI4 141 aa15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 CSTBP04080 98 aaKnown RBP15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 CAPGP40121 348 aa15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 MED21Q13503 144 aa15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 SLC22A6Q4U2R8 563 aa15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 NHLRC3Q5JS37 347 aa15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 C16orf82Q7Z2V1 217 aa15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 OR14A2Q96R54 314 aa15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 IFT22Q9H7X7 185 aa15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 PSG11Q9UQ72 335 aa15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 HSPE1-MOB4S4R3N1 261 aa15.4■□□□□ 0.06
SMARCB1-204ENST00000407422 ANKRD65E5RJM6 399 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 J3QR06 171 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 AMY1AP04745 511 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 AMY2AP04746 511 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 KCNJ3P48549 501 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 ARHGDIBP52566 201 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 ABCA11PQ4W5N1 156 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 OGFRL1Q5TC84 451 aaPredicted RBP15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 C8orf59Q8N0T1 100 aaPredicted RBP15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 RBM14Q96PK6 669 aaKnown RBP15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 S100A13Q99584 98 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 DNAH3Q8TD57 4116 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 TRBV5-7A0A0A0MS05 114 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 EFCAB10A6NFE3 127 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 GPX5O75715 221 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 OR2F2O95006 317 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 DIAPH2-AS1Q14236 149 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 AHSA2Q719I0 299 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 NDUFA11Q86Y39 141 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 FBLIM1Q8WUP2 373 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 AKR1E2Q96JD6 320 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 CNOT2Q9NZN8 540 aaKnown RBP15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 CKLFQ9UBR5 152 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 PSORS1C1Q9UIG5 152 aa15.39■□□□□ 0.05
SMARCB1-204ENST00000407422 OOSP1A8MZH6 123 aa15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 CASQ2O14958 399 aaPredicted RBP15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 LPLP06858 475 aa15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 MNDAP41218 407 aa15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 GNG10P50151 68 aa15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 EMX1Q04741 257 aaPredicted RBP15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 ATAD3CQ5T2N8 411 aa15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 CCDC144NLQ6NUI1 221 aa15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 BPIFB6Q8NFQ5 453 aa15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 OR5AU1Q8NGC0 362 aa15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 CAPSLQ8WWF8 208 aa15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 TOMM40LQ969M1 308 aa15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 MUL1Q969V5 352 aa15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 RPEQ96AT9 228 aa15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 PAK1IP1Q9NWT1 392 aaPredicted RBP15.38■□□□□ 0.05
SMARCB1-204ENST00000407422 A0A1W2PPE3 182 aa15.37■□□□□ 0.05
SMARCB1-204ENST00000407422 FSTP19883 344 aa15.37■□□□□ 0.05
SMARCB1-204ENST00000407422 JAGN1Q8N5M9 183 aa15.37■□□□□ 0.05
SMARCB1-204ENST00000407422 OR56B4Q8NH76 319 aa15.37■□□□□ 0.05
SMARCB1-204ENST00000407422 UBALD1Q8TB05 177 aa15.37■□□□□ 0.05
SMARCB1-204ENST00000407422 R3HDM4Q96D70 268 aa15.37■□□□□ 0.05
SMARCB1-204ENST00000407422 ZNF780AO75290 641 aaPredicted RBP15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 GTF2F2P13984 249 aa15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 CELP19835 753 aa15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 MPV17LQ2QL34 196 aa15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 BEAN1Q3B7T3 259 aa15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 SAMD5Q5TGI4 173 aa15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 FAM53AQ6NSI3 398 aaPredicted RBP15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 LINC00596Q86U02 117 aa15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 STX19Q8N4C7 294 aa15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 CCDC107Q8WV48 283 aa15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 DERL3Q96Q80 235 aa15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 PLCXD1Q9NUJ7 323 aa15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 MRPS28Q9Y2Q9 187 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms