RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 KNTC1P50748 2209 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 ST8SIA3O43173 380 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 EIF3GO75821 320 aaKnown RBP eCLIP8.4□□□□□ -1.07
MSH2-202ENST00000406134 IGKV1-39P01597 117 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 IGKV1D-39P04432 117 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 UCP1P25874 307 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 MAS1LP35410 378 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 PCBD1P61457 104 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 ID3Q02535 119 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 HAGHQ16775 308 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 EIF5AL1Q6IS14 154 aaKnown RBP8.4□□□□□ -1.07
MSH2-202ENST00000406134 MEX3BQ6ZN04 569 aaKnown RBP8.4□□□□□ -1.07
MSH2-202ENST00000406134 WDR86Q86TI4 376 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 C15orf54Q8N8G6 183 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 ZNF565Q8N9K5 539 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 KDF1Q8NAX2 398 aaPredicted RBP8.4□□□□□ -1.07
MSH2-202ENST00000406134 ISOC2Q96AB3 205 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 TAAR9Q96RI9 348 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 GP6Q9HCN6 339 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 MLXQ9UH92 298 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 LOXL2Q9Y4K0 774 aa8.4□□□□□ -1.07
MSH2-202ENST00000406134 C7orf77A4D0Y5 90 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 SLC34A2O95436 690 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 ZNF806P0C7X5 589 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 SELLP14151 372 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 CYB561P49447 251 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 SMCO1Q147U7 214 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 ZNF324BQ6AW86 544 aaPredicted RBP8.39□□□□□ -1.07
MSH2-202ENST00000406134 OR2C3Q8N628 320 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 SUMF1Q8NBK3 374 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 HSD17B11Q8NBQ5 300 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 POM121Q96HA1 1249 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 PARPBPQ9NWS1 579 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 SLC7A11Q9UPY5 501 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 ADAM20O43506 726 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 IGHEP01854 428 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 ATP6V0CP27449 155 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 PLA2G5P39877 138 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 PEA15Q15121 130 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 TMEM182Q6ZP80 229 aaPredicted RBP8.39□□□□□ -1.07
MSH2-202ENST00000406134 SFT2D1Q8WV19 159 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 ZNF442Q9H7R0 627 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 CCL28Q9NRJ3 127 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 KPTNQ9Y664 436 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 C5orf49A4QMS7 147 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 HSPB6O14558 160 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 CER1O95813 267 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 FABP1P07148 127 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 MAGEA5P43359 124 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 C3AR1Q16581 482 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 NUFIP2Q7Z417 695 aaKnown RBP8.39□□□□□ -1.07
MSH2-202ENST00000406134 STX12Q86Y82 276 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 OR5P3Q8WZ94 311 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 C14orf79Q96F83 325 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 PAPOLGQ9BWT3 736 aaKnown RBP8.39□□□□□ -1.07
MSH2-202ENST00000406134 HIPK2Q9H2X6 1198 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 TUBA4BQ9H853 241 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 LRFN1Q9P244 771 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 TINAGQ9UJW2 476 aa8.39□□□□□ -1.07
MSH2-202ENST00000406134 TRBV6-6A0A0A6YYG2 114 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 A0A1W2PPH5 198 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 A6NLC8 198 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 GPR37O15354 613 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 IL18BPO95998 194 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 IGHV2-5P01817 119 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 DCAF12Q5T6F0 453 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 C6orf15Q6UXA7 325 aaPredicted RBP8.38□□□□□ -1.07
MSH2-202ENST00000406134 Q6ZRM9 215 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 COMMD1Q8N668 190 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 TMEM252Q8N6L7 170 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 NANPQ8TBE9 248 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 C20orf24Q9BUV8 137 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 TTTY12Q9BZ98 90 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 MAGT1Q9H0U3 335 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 LIPGQ9Y5X9 500 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 ATP23Q9Y6H3 246 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 TRBV23-1A0A0A0MS06 115 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 CDRT15L2A8MXV6 281 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 UBE2CO00762 179 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 SSSCA1O60232 199 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 RHBDL1O75783 438 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 COX5BP10606 129 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 ZNF616Q08AN1 781 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 RBMS3Q6XE24 437 aaKnown RBP8.38□□□□□ -1.07
MSH2-202ENST00000406134 DPPA2Q7Z7J5 298 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 SUMF2Q8NBJ7 301 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 SPACA1Q9HBV2 294 aa8.38□□□□□ -1.07
MSH2-202ENST00000406134 ZNF732B4DXR9 585 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 TSPAN15O95858 294 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 MEOX2P50222 304 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 Q6P435 159 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 ZDHHC23Q8IYP9 409 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 THOC3Q96J01 351 aaKnown RBP8.37□□□□□ -1.07
MSH2-202ENST00000406134 SMCO4Q9NRQ5 59 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 RYDENQ9NUL5 291 aaKnown RBP8.37□□□□□ -1.07
MSH2-202ENST00000406134 ATXN7O15265 892 aaPredicted RBP8.37□□□□□ -1.07
MSH2-202ENST00000406134 PGLYRP1O75594 196 aaPredicted RBP8.37□□□□□ -1.07
MSH2-202ENST00000406134 NXPH3O95157 252 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 WNT2P09544 360 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 DUSP3P51452 185 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms