RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 ELOBQ15370 118 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 ZNF506Q5JVG8 444 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 FFAR4Q5NUL3 377 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 TMEM211Q6ICI0 200 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 YRDCQ86U90 279 aaKnown RBP12.16□□□□□ -0.46
HMGA2-204ENST00000403681 RTN4RL2Q86UN3 420 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 UBALD1Q8TB05 177 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 SPACA9Q96E40 222 aaPredicted RBP12.16□□□□□ -0.46
HMGA2-204ENST00000403681 NEIL1Q96FI4 390 aaPredicted RBP12.16□□□□□ -0.46
HMGA2-204ENST00000403681 SEBOXQ9HB31 216 aaPredicted RBP12.16□□□□□ -0.46
HMGA2-204ENST00000403681 LYRM2Q9NU23 88 aaPredicted RBP12.16□□□□□ -0.46
HMGA2-204ENST00000403681 ALPK3Q96L96 1907 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 A0A0A6YYD4 124 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 DVL1O14640 695 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 SPCS3P61009 180 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 CCL20P78556 96 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 TMEM183BQ1AE95 376 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.16□□□□□ -0.46
HMGA2-204ENST00000403681 ATG101Q9BSB4 218 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 PCGF1Q9BSM1 259 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 MTCH2Q9Y6C9 303 aa12.16□□□□□ -0.46
HMGA2-204ENST00000403681 RPLP1P05386 114 aaKnown RBP12.15□□□□□ -0.46
HMGA2-204ENST00000403681 ZNF32P17041 273 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 CD27P26842 260 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 OR10J1P30954 320 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 FAM3BP58499 235 aaPredicted RBP12.15□□□□□ -0.46
HMGA2-204ENST00000403681 MRPL30Q8TCC3 161 aaKnown RBP12.15□□□□□ -0.46
HMGA2-204ENST00000403681 NAT6Q93015 286 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 HLA-CQ95604 372 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 CLDN23Q96B33 292 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 GPHA2Q96T91 129 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 HEYLQ9NQ87 328 aaPredicted RBP12.15□□□□□ -0.46
HMGA2-204ENST00000403681 CBLN4Q9NTU7 201 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 MPDZO75970 2070 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 ZNF814B7Z6K7 855 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 GDF1P27539 372 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 FOXL2P58012 376 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 GAB4Q2WGN9 574 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 H2BFWTQ7Z2G1 175 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 TMEM183AQ8IXX5 376 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 ZNF808Q8N4W9 903 aaPredicted RBP12.15□□□□□ -0.46
HMGA2-204ENST00000403681 OR10G4Q8NGN3 311 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 OR10G9Q8NGN4 311 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 OR10G7Q8NGN6 311 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 MOB3AQ96BX8 217 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 WFDC1Q9HC57 220 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 MED12Q93074 2177 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 TDRD6O60522 2096 aaKnown RBP12.15□□□□□ -0.46
HMGA2-204ENST00000403681 IGSF23A1L1A6 192 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 ZNF732B4DXR9 585 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 OTX2P32243 289 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 PMELP40967 661 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 GABRA4P48169 554 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 GPM6AP51674 278 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 CEACAM16Q2WEN9 425 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 DMBX1Q8NFW5 382 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 CMTM2Q8TAZ6 248 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 ANAPC16Q96DE5 110 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 TBX15Q96SF7 602 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 LANCL2Q9NS86 450 aa12.15□□□□□ -0.46
HMGA2-204ENST00000403681 A0A0U1RQV5 110 aa12.15□□□□□ -0.47
HMGA2-204ENST00000403681 TNFSF11O14788 317 aa12.15□□□□□ -0.47
HMGA2-204ENST00000403681 CA11O75493 328 aa12.15□□□□□ -0.47
HMGA2-204ENST00000403681 KRASP01116 189 aa12.15□□□□□ -0.47
HMGA2-204ENST00000403681 CXCL1P09341 107 aa12.15□□□□□ -0.47
HMGA2-204ENST00000403681 NTF3P20783 257 aa12.15□□□□□ -0.47
HMGA2-204ENST00000403681 BMP5P22003 454 aa12.15□□□□□ -0.47
HMGA2-204ENST00000403681 KLHDC3Q9BQ90 382 aa12.15□□□□□ -0.47
HMGA2-204ENST00000403681 HEATR5AQ86XA9 2040 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 IGHEP01854 428 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 Q96M66 194 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 GNRHR2Q96P88 292 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 ANGPTL4Q9BY76 406 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 RTN4RQ9BZR6 473 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 MYF5P13349 255 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 CHRNB4P30926 498 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 LHFPL1Q86WI0 220 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 C14orf144Q96I85 54 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 GPR27Q9NS67 375 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 MYOTQ9UBF9 498 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 CXCL13O43927 109 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 NXPH2O95156 264 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 CFPP27918 469 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 LTC4SQ16873 150 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 FNDC7Q5VTL7 733 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 ZDHHC23Q8IYP9 409 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 FAM58AQ8N1B3 248 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 HIST3H2BBQ8N257 126 aa12.14□□□□□ -0.47
HMGA2-204ENST00000403681 K7N7A8 449 aa12.13□□□□□ -0.47
HMGA2-204ENST00000403681 SLC25A6P12236 298 aa12.13□□□□□ -0.47
HMGA2-204ENST00000403681 CNN1P51911 297 aaKnown RBP12.13□□□□□ -0.47
HMGA2-204ENST00000403681 OR5I1Q13606 314 aa12.13□□□□□ -0.47
HMGA2-204ENST00000403681 OR8B8Q15620 311 aa12.13□□□□□ -0.47
HMGA2-204ENST00000403681 ZNF439Q8NDP4 499 aa12.13□□□□□ -0.47
HMGA2-204ENST00000403681 RHBDD1Q8TEB9 315 aa12.13□□□□□ -0.47
HMGA2-204ENST00000403681 TP53RKQ96S44 253 aa12.13□□□□□ -0.47
HMGA2-204ENST00000403681 FOXB1Q99853 325 aa12.13□□□□□ -0.47
HMGA2-204ENST00000403681 MSL2Q9HCI7 577 aa12.13□□□□□ -0.47
HMGA2-204ENST00000403681 B4GALT7Q9UBV7 327 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms