RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 SAP30LQ9HAJ7 183 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 GSN-AS1Q9NRJ2 163 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 MAB21L2Q9Y586 359 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 SESN1Q9Y6P5 492 aa9.82□□□□□ -0.84
SKA3-203ENST00000400018 POM121CA8CG34 1229 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 FOXI3A8MTJ6 420 aaPredicted RBP9.81□□□□□ -0.84
SKA3-203ENST00000400018 LYRM1O43325 122 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 ECDO95905 644 aaPredicted RBP9.81□□□□□ -0.84
SKA3-203ENST00000400018 CYB5AP00167 134 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 PGA5P0DJD9 388 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 CHATP28329 748 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 APOBEC3AP31941 199 aaPredicted RBP9.81□□□□□ -0.84
SKA3-203ENST00000400018 HRH1P35367 487 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 UNQ6126/PRO20091Q6UXV3 157 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 FAM216BQ8N7L0 139 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 OR11H7Q8NGC8 314 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 OR4C16Q8NGL9 310 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 CCL13Q99616 98 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 NRIP2Q9BQI9 281 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 OPA3Q9H6K4 179 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 DECR2Q9NUI1 292 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 MLXQ9UH92 298 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 FCN3O75636 299 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 OMGP23515 440 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 CPT2P23786 658 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 CFPP27918 469 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 UBE2MP61081 183 aaKnown RBP9.81□□□□□ -0.84
SKA3-203ENST00000400018 FGF12P61328 243 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 IL24Q13007 206 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 LYPD2Q6UXB3 125 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 FAM90A1Q86YD7 464 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 DUSP18Q8NEJ0 188 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 OR51S1Q8NGJ8 323 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 MARVELD1Q9BSK0 173 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 HRASLSQ9HDD0 168 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 PRR13Q9NZ81 148 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 CSPG4Q6UVK1 2322 aa9.81□□□□□ -0.84
SKA3-203ENST00000400018 IGKV1D-17A0A075B6S4 117 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 GABARAPH6UMI1 98 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 RBBP9O75884 186 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 KLF9Q13886 244 aaPredicted RBP9.8□□□□□ -0.84
SKA3-203ENST00000400018 ASCL4Q6XD76 172 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 SLC16A13Q7RTY0 426 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 OVCH2Q7RTZ1 564 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 FAM89BQ8N5H3 189 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 PXT1Q8NFP0 134 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 OR56B1Q8NGI3 324 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 RFESDQ8TAC1 157 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 GPX8Q8TED1 209 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 MED28Q9H204 178 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 OR10A4Q9H209 315 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 DOCK11Q5JSL3 2073 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 KRBOX1C9JBD0 128 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 H7C2Y5 167 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 DEGS1O15121 323 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 PSG2P11465 335 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 PPP3CBP16298 524 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 RAB6AP20340 208 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 ERVK11-1P61568 191 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 SORDQ00796 357 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 COL10A1Q03692 680 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 HACD4Q5VWC8 232 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 ACP7Q6ZNF0 438 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 CHMP1AQ9HD42 196 aaPredicted RBP9.8□□□□□ -0.84
SKA3-203ENST00000400018 PLEKHA6Q9Y2H5 1048 aa9.8□□□□□ -0.84
SKA3-203ENST00000400018 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.79□□□□□ -0.84
SKA3-203ENST00000400018 J3QW42 95 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 RGS11O94810 467 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 SNAPINO95295 136 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 HAND1O96004 215 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 PLA2G2AP14555 144 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 CXCL3P19876 107 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 MPZP25189 248 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 GLIPR1P48060 266 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 RPS23P62266 143 aaKnown RBP9.79□□□□□ -0.84
SKA3-203ENST00000400018 MICBQ29980 383 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 MZT2BQ6NZ67 158 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 Q6P435 159 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 BAIAP2L2Q6UXY1 529 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 FAM219AQ8IW50 185 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 SLC6A7Q99884 636 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 CMSS1Q9BQ75 279 aaKnown RBP9.79□□□□□ -0.84
SKA3-203ENST00000400018 PARP12Q9H0J9 701 aaKnown RBP9.79□□□□□ -0.84
SKA3-203ENST00000400018 TMEM82A0PJX8 343 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 H7C417 338 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 SLC33A1O00400 549 aaPredicted RBP9.79□□□□□ -0.84
SKA3-203ENST00000400018 ATG12O94817 140 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 SCTP09683 121 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 C21orf62-AS1Q17RA5 79 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 PAN3Q58A45 887 aaKnown RBP9.79□□□□□ -0.84
SKA3-203ENST00000400018 OR2W3Q7Z3T1 314 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 TMEM200AQ86VY9 491 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 ZNF565Q8N9K5 539 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 IL1F10Q8WWZ1 152 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 IGFBPL1Q8WX77 278 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 LRRC46Q96FV0 321 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 TM2D1Q9BX74 207 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 NUDT15Q9NV35 164 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 MTFP1Q9UDX5 166 aa9.79□□□□□ -0.84
SKA3-203ENST00000400018 IGHV3-43A0A0B4J1X8 118 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 298.2 ms