RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 MBLAC1A4D2B0 266 aaPredicted RBP7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 TSPAN12O95859 305 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 SUMO3P55854 103 aaPredicted RBP7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 CEACAM7Q14002 265 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 ZNF683Q8IZ20 524 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 P2RX4Q99571 388 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 NRSN2Q9GZP1 204 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 JPT2Q9H910 190 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 SEMG1P04279 462 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 SEC61GP60059 68 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 EXOSC7Q15024 291 aaKnown RBP7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 LINC00346Q8IVM7 164 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 Q6ZNX1 250 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 C16orf82Q7Z2V1 217 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 SOSTQ9BQB4 213 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 GPR84Q9NQS5 396 aa7.65□□□□□ -1.18
CACNA1C-220ENST00000399655 IGLON5A6NGN9 336 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 PAGE4O60829 102 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 SELENOTP62341 195 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 CST6Q15828 149 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 TSPO2Q5TGU0 170 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 KISS1RQ969F8 398 aaPredicted RBP7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 CHKB-CPT1BH3BT56 60 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 IBA57Q5T440 356 aaKnown RBP7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 Q6ZSR6 202 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 CBLL1Q75N03 491 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 C1orf127Q8N9H9 656 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 NFAM1Q8NET5 270 aaPredicted RBP7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 CHAC1Q9BUX1 264 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 A4GALTQ9NPC4 353 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 TAAR2Q9P1P5 351 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 MAGI2Q86UL8 1455 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 KIF13BQ9NQT8 1826 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 LINC00869P0C866 280 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 C6orf132Q5T0Z8 1188 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 FAM222BQ8WU58 562 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 TNFRSF18Q9Y5U5 241 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 HECW2Q9P2P5 1572 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 FURINP09958 794 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 TSPAN32Q96QS1 320 aa7.65□□□□□ -1.19
CACNA1C-220ENST00000399655 FGF8P55075 233 aaPredicted RBP7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 CLECL1Q8IZS7 167 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 PLEKHB1Q9UF11 243 aaPredicted RBP7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 LOXL2Q9Y4K0 774 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 NTHL1P78549 312 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 TCTEX1D4Q5JR98 221 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 Q7L0L9 218 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 NKAIN4Q8IVV8 208 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 QTRT1Q9BXR0 403 aaKnown RBP7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 ASCL3Q9NQ33 180 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 C9orf40Q8IXQ3 194 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 FGF13Q92913 245 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 UBE2E2Q96LR5 201 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 ZNF646O15015 1829 aaPredicted RBP7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 TRAV12-3A0A0B4J271 114 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 TMEM150BA6NC51 233 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 CXorf49A8MYA2 514 aaPredicted RBP7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 ECM1Q16610 540 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 TMEM255AQ5JRV8 349 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 SCNM1Q9BWG6 230 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 PPT2Q9UMR5 302 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 NTNG1Q9Y2I2 539 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 OPRM1P35372 400 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 TDGF1P3P51864 188 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 LHFPL5Q8TAF8 219 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 KLF13Q9Y2Y9 288 aaPredicted RBP7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 OR1P1Q8NH06 330 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 SURF2Q15527 256 aaPredicted RBP7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 GAGE13Q4V321 117 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 TEPPQ6URK8 271 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 LYG1Q8N1E2 194 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 PRDM14Q9GZV8 571 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 MBD1Q9UIS9 605 aaPredicted RBP7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 MROH2AA6NES4 1674 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 KCNE1BA0A087WTH5 132 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 A0A1W2PR48 441 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 H1FOOQ8IZA3 346 aaPredicted RBP7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 NEU1Q99519 415 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 TDGF1P13385 188 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 Q6ZVL8 140 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 SYS1Q8N2H4 156 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 SLC25A40Q8TBP6 338 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 MYBPHLA2RUH7 354 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 NPIPB8E9PQR5 432 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 NPIPB9F8W1W9 429 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 PLPP2O43688 288 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 NPIPB7O75200 414 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 DCTDP32321 178 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 ADRA1AP35348 466 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 SELENBP1Q13228 472 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 TIMM23BQ5SRD1 257 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 NEURL3Q96EH8 262 aa7.64□□□□□ -1.19
CACNA1C-220ENST00000399655 HCFC1P51610 2035 aa7.63□□□□□ -1.19
CACNA1C-220ENST00000399655 IRF2BP1Q8IU81 584 aa7.63□□□□□ -1.19
CACNA1C-220ENST00000399655 ANKRD29Q8N6D5 301 aa7.63□□□□□ -1.19
CACNA1C-220ENST00000399655 ST8SIA1Q92185 356 aa7.63□□□□□ -1.19
CACNA1C-220ENST00000399655 ZNF257Q9Y2Q1 563 aa7.63□□□□□ -1.19
CACNA1C-220ENST00000399655 M0R2P5 195 aa7.63□□□□□ -1.19
CACNA1C-220ENST00000399655 CEACAM6P40199 344 aa7.63□□□□□ -1.19
CACNA1C-220ENST00000399655 GNG3P63215 75 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms