RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 IGHV4-34P06331 123 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 LIFP15018 202 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 HLA-GP17693 338 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 ZNF324BQ6AW86 544 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 MANBALQ9NQG1 85 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 TMEM167BQ9NRX6 74 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 PLSCR2Q9NRY7 297 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 CXorf66Q5JRM2 361 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 C12orf57Q99622 126 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 MAP1LC3CQ9BXW4 147 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 IL21Q9HBE4 155 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 TMSB15BA0A087X1C1 80 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 IGHV5-10-1A0A0J9YXX1 117 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 PRR35P0CG20 571 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 TIAL1Q01085 375 aaKnown RBP eCLIP9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 D2HGDHQ8N465 521 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 VSTM2AQ8TAG5 236 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 OPN3Q9H1Y3 402 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 NAA60Q9H7X0 242 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 CACNG5Q9UF02 275 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 ISXQ2M1V0 245 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 FAHD1Q6P587 224 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 Q6ZN92 141 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 OR5C1Q8NGR4 320 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 SMIM4Q8WVI0 70 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 TMEM37Q8WXS4 190 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 PTX4Q96A99 478 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 SPNS1Q9H2V7 528 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 ASCL3Q9NQ33 180 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 RNF7Q9UBF6 113 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 ZNF32P17041 273 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 RPS4Y1P22090 263 aaKnown RBP9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 CD96P40200 585 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 RPL29P47914 159 aaKnown RBP9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 RIGQ13278 110 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 IL13RA2Q14627 380 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 TBX15Q96SF7 602 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 ZNF426Q9BUY5 554 aa9.76□□□□□ -0.85
CACNA1C-215ENST00000399637 ATAD5Q96QE3 1844 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 PRR32B1ATL7 298 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 SLC37A1P57057 533 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 UBE2L3P68036 154 aaKnown RBP9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 SAPCD1Q5SSQ6 148 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 ZMIZ1Q9ULJ6 1067 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 IGHV3-21A0A0B4J1V1 117 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 LMX1BO60663 402 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 ETHE1O95571 254 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 HIST1H1EP10412 219 aaKnown RBP9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 RAX2Q96IS3 184 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 TP53RKQ96S44 253 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 ZNF665Q9H7R5 613 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 KCNE3Q9Y6H6 103 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 TRAV21A0A0B4J279 112 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 ZNF735P0CB33 412 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 WDR38Q5JTN6 314 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 CCDC144NLQ6NUI1 221 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 DUSP18Q8NEJ0 188 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 ATG101Q9BSB4 218 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 SS18L1O75177 396 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 NMUP48645 174 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 MRPL58Q14197 206 aaKnown RBP9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 FAM78BQ5VT40 261 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 MUC20Q8N307 709 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 CCL27Q9Y4X3 112 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 IGSF23A1L1A6 192 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 IFITM10A6NMD0 228 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 LDLRAD4O15165 306 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 FAM106CPP0CH98 169 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 KIR3DL2P43630 455 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 PMS2P11Q13670 270 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 LY6DQ14210 128 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 C16orf47Q6ZP98 133 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 REC114Q7Z4M0 266 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 TP53I13Q8NBR0 393 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 SMRP1Q8NCR6 262 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 MYOZ3Q8TDC0 251 aa9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 DUSP15Q9H1R2 295 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 MYH9P35579 1960 aaKnown RBP9.75□□□□□ -0.85
CACNA1C-215ENST00000399637 A0A0B4J2E0 115 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 A0A1B0GX12 115 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 ZP3P21754 424 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 GABRA6Q16445 453 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 LSMEM1Q8N8F7 131 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 Q8WTZ3 238 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 R3HDM4Q96D70 268 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 CNRIP1Q96F85 164 aaPredicted RBP9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 TSPAN32Q96QS1 320 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 C9orf170A2RU37 121 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 SLC6A1P30531 599 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 SRD5A2P31213 254 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 SUCLG1P53597 346 aaKnown RBP9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 FGF8P55075 233 aaPredicted RBP9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 FMODQ06828 376 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 C6orf201Q7Z4U5 140 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 PLAC1Q9HBJ0 212 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 TRBV5-4A0A0C4DH59 114 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 RER1O15258 196 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 ZNF25P17030 456 aaPredicted RBP9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 ANKRD55Q3KP44 614 aa9.74□□□□□ -0.85
CACNA1C-215ENST00000399637 ZBTB37Q5TC79 503 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms