RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ZNF774Q6NX45 483 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 SLC23A3Q6PIS1 610 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 MRGPREQ86SM8 312 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 MMD2Q8IY49 270 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 PAQR4Q8N4S7 273 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR52N4Q8NGI2 321 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 EDARADDQ8WWZ3 215 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 TAAR8Q969N4 342 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 ZBTB8AQ96BR9 441 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 SPACA5Q96QH8 159 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 LPAR4Q99677 370 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 ACTR6Q9GZN1 396 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 CXXC4Q9H2H0 198 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 DKKL1Q9UK85 242 aa5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 RCL1Q9Y2P8 373 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-202ENST00000399438 C9orf170A2RU37 121 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 FAM74A7A6NL05 159 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 J3QRE1 110 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 SSNA1O43805 119 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 RP2O75695 350 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 SP1P08047 785 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 CST2P09228 141 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 HIST1H1EP10412 219 aaKnown RBP5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 ZNF17P17021 662 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 KLK2P20151 261 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 ANOS1P23352 680 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 ATXN7L3Q14CW9 347 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 FAM74A3Q4VXF1 159 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 ALG10Q5BKT4 473 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 HBMQ6B0K9 141 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 TMEM205Q6UW68 189 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 Q6ZT83 130 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 C5orf24Q7Z6I8 188 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 C1QL4Q86Z23 238 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 ABHD12Q8N2K0 398 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 TOMM5Q8N4H5 51 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 GDPD1Q8N9F7 314 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR10G3Q8NGC4 313 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR11H4Q8NGC9 324 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 SYNPRQ8TBG9 265 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 DEDD2Q8WXF8 326 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 TMEM234Q8WY98 164 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 CLDN23Q96B33 292 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 SMIM19Q96E16 107 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 ZNF488Q96MN9 340 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 ST6GALNAC2Q9UJ37 374 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 TRAPPC4Q9Y296 219 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 THADAQ6YHU6 1953 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 FER1L5A0AVI2 2057 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 CXorf65A6NEN9 183 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 CDIPTO14735 213 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 IFNGP01579 166 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 RPS4Y1P22090 263 aaKnown RBP5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 SLC2A5P22732 501 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 GDF1P27539 372 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 ERP29P30040 261 aaKnown RBP5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 FGF9P31371 208 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 VEGFCP49767 419 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 CLDN6P56747 220 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 RPS11P62280 158 aaKnown RBP eCLIP5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 ZNF117Q03924 483 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 HSD17B12Q53GQ0 312 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 GGNBP1Q5YKI7 109 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 Q6ZS46 218 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR11H7Q8NGC8 314 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 OR1L3Q8NH93 324 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 MED29Q9NX70 200 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 FZR1Q9UM11 496 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 LOXL2Q9Y4K0 774 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 MGAQ8IWI9 3026 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 IGHV1OR15-9A0A0B4J2B8 117 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 BTCP35070 178 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 CDK5R1Q15078 307 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 SLC25A30Q5SVS4 291 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 SLC36A1Q7Z2H8 476 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 ZNF676Q8N7Q3 588 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 HHLA2Q9UM44 414 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 DMXL1Q9Y485 3027 aa5.29□□□□□ -1.56
TRAPPC13-202ENST00000399438 DLEU1O43261 78 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 SLC16A7O60669 478 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 KHDRBS3O75525 346 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 CELA2AP08217 269 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 SMIM6P0DI80 62 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 GATA1P15976 413 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 SPINK2P20155 84 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 CD38P28907 300 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 FBXW4P57775 412 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 CDK10Q15131 360 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 MESTQ5EB52 335 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 Q6ZTK2 550 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 HS3ST6Q96QI5 342 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 TSPAN32Q96QS1 320 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 ARL6Q9H0F7 186 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 MED28Q9H204 178 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 KIR2DS5A0A0G2JLQ3 304 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 A0A0G2JNG1 304 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 CIB4A0PJX0 185 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 FAM172BPA6NC97 362 aa5.28□□□□□ -1.56
TRAPPC13-202ENST00000399438 KIR2DS3K7RE56 304 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms