RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 GPR87Q9BY21 358 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 PITPNC1Q9UKF7 332 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 IGKV1D-13A0A0B4J2D9 117 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 LOC102725191A0A1B0GVB3 256 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 IGKV1-13P0DP09 117 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 BCL2P10415 239 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 NPBWR2P48146 333 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 PAX9P55771 341 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 NMSQ5H8A3 153 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 WDR25Q64LD2 544 aaPredicted RBP12.03□□□□□ -0.48
APOB-202ENST00000399256 ASCL4Q6XD76 172 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 FAM185AQ8N0U4 392 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 PIGCQ92535 297 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 RPRMQ9NS64 109 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 GAB2Q9UQC2 676 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 SDK1Q7Z5N4 2213 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 SCTP09683 121 aa12.02□□□□□ -0.48
APOB-202ENST00000399256 GZMBP10144 247 aa12.02□□□□□ -0.48
APOB-202ENST00000399256 CRYGSP22914 178 aa12.02□□□□□ -0.48
APOB-202ENST00000399256 TUBG1P23258 451 aa12.02□□□□□ -0.48
APOB-202ENST00000399256 RBM11P57052 281 aaKnown RBP12.02□□□□□ -0.48
APOB-202ENST00000399256 PLCXD3Q63HM9 321 aa12.02□□□□□ -0.48
APOB-202ENST00000399256 TMEM211Q6ICI0 200 aa12.02□□□□□ -0.48
APOB-202ENST00000399256 FOXL2NBQ6ZUU3 175 aa12.02□□□□□ -0.48
APOB-202ENST00000399256 SSX7Q7RTT5 188 aa12.02□□□□□ -0.48
APOB-202ENST00000399256 IGHV1OR15-9A0A0B4J2B8 117 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 HSPB6O14558 160 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 ZFAND5O76080 213 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 AMBPP02760 352 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 MRPS34P82930 218 aaKnown RBP12.02□□□□□ -0.49
APOB-202ENST00000399256 TLE1Q04724 770 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 IZUMO4Q1ZYL8 232 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 CALHM1Q8IU99 346 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 TGIF2LXQ8IUE1 241 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 TMEM183AQ8IXX5 376 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 OR10G4Q8NGN3 311 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 LURAP1Q96LR2 239 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 RASL10BQ96S79 203 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 SDF2L1Q9HCN8 221 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 CCL28Q9NRJ3 127 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 CISD1Q9NZ45 108 aaKnown RBP12.02□□□□□ -0.49
APOB-202ENST00000399256 TAAR3PQ9P1P4 343 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 CFAP54Q96N23 3096 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 ZNF705GA8MUZ8 300 aaPredicted RBP12.02□□□□□ -0.49
APOB-202ENST00000399256 IFNA5P01569 189 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 APLNRP35414 380 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 HNRNPKP61978 463 aaKnown RBP eCLIP12.02□□□□□ -0.491e-9■■■■□ 22.1
APOB-202ENST00000399256 H3F3AP84243 136 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 PNRC1Q12796 327 aaPredicted RBP12.02□□□□□ -0.49
APOB-202ENST00000399256 IL24Q13007 206 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 CLN3Q13286 438 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 JOSD1Q15040 202 aaPredicted RBP12.02□□□□□ -0.49
APOB-202ENST00000399256 OR8B8Q15620 311 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 DPPA3Q6W0C5 159 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 SYT13Q7L8C5 426 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 ZNF664Q8N3J9 261 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 MAFAQ8NHW3 353 aaPredicted RBP12.02□□□□□ -0.49
APOB-202ENST00000399256 C2orf88Q9BSF0 95 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 CDH20Q9HBT6 801 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 DKKL1Q9UK85 242 aa12.02□□□□□ -0.49
APOB-202ENST00000399256 A0A0G2JRQ6 117 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 CEBPZOSA8MTT3 80 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 G3V3Y1 287 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 FGF7P21781 194 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 VDAC1P21796 283 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 COL10A1Q03692 680 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 DAZAP2Q15038 168 aaPredicted RBP12.01□□□□□ -0.49
APOB-202ENST00000399256 ZNF726P1Q15940 193 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 RAET1LQ5VY80 246 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 WDR5BQ86VZ2 330 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 H1FOOQ8IZA3 346 aaPredicted RBP12.01□□□□□ -0.49
APOB-202ENST00000399256 MAML2Q8IZL2 1156 aaPredicted RBP12.01□□□□□ -0.49
APOB-202ENST00000399256 EXTL1Q92935 676 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 SPACA9Q96E40 222 aaPredicted RBP12.01□□□□□ -0.49
APOB-202ENST00000399256 PTRH2Q9Y3E5 179 aaKnown RBP12.01□□□□□ -0.49
APOB-202ENST00000399256 WDR87Q6ZQQ6 2873 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 TRBV24-1A0A075B6N3 115 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 MKRN2OSH3BPM6 223 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 SYNGR3O43761 229 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 TK1P04183 234 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 RAB35Q15286 201 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 CLEC12BQ2HXU8 276 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 RHBDD2Q6NTF9 364 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 SLC25A26Q70HW3 274 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 OR10A7Q8NGE5 316 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 OR1F12Q8NHA8 337 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 CA5BP1Q8WTZ4 195 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 ABHD14BQ96IU4 210 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 TMEM242Q9NWH2 141 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 RNF115Q9Y4L5 304 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 EML6Q6ZMW3 1958 aa12.01□□□□□ -0.49
APOB-202ENST00000399256 SLC22A20A6NK97 555 aa12□□□□□ -0.49
APOB-202ENST00000399256 A8MWP6 167 aa12□□□□□ -0.49
APOB-202ENST00000399256 TGOLN2O43493 480 aa12□□□□□ -0.49
APOB-202ENST00000399256 OPN1MWP04001 364 aa12□□□□□ -0.49
APOB-202ENST00000399256 OPN1MW2P0DN77 364 aa12□□□□□ -0.49
APOB-202ENST00000399256 OPN1MW3P0DN78 364 aa12□□□□□ -0.49
APOB-202ENST00000399256 PAX1P15863 534 aa12□□□□□ -0.49
APOB-202ENST00000399256 CD27P26842 260 aa12□□□□□ -0.49
APOB-202ENST00000399256 OR8G1Q15617 311 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms