RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 RXFP4Q8TDU9 374 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 RAB1CQ92928 201 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 APH1AQ96BI3 265 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 MYOZ1Q9NP98 299 aaPredicted RBP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 OR14J1Q9UGF5 321 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ATP5LO75964 103 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 DNAL4O96015 105 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 SPEM2Q0P670 501 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 OR2T2Q6IF00 324 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ETV3LQ6ZN32 361 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 C1orf87Q8N0U7 546 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 SAP25Q8TEE9 199 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 EEF1AKMT3Q96AZ1 226 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 SFRP2Q96HF1 295 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ZFP57Q9NU63 452 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 MED9Q9NWA0 146 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 TRAPPC2LQ9UL33 140 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 NKX2-6A6NCS4 301 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 CA1P00915 261 aaPredicted RBP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 SERPINE2P07093 398 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ICAM2P13598 275 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 PCBD1P61457 104 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 FAM24BQ8N5W8 94 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 M1APQ8TC57 530 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 HAS2Q92819 552 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ISOC2Q96AB3 205 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 BORCS7Q96B45 105 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 PINX1Q96BK5 328 aaKnown RBP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM70Q9BUB7 260 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 CDH20Q9HBT6 801 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 MMP26Q9NRE1 261 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 MCTS1Q9ULC4 181 aaKnown RBP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 PRELID3BQ9Y3B1 194 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 TANC2Q9HCD6 1990 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 LOC390937A0A1W2PQ73 354 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 CST7O76096 145 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 CRYBA1P05813 215 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 COX6A1P12074 109 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 FUT6P51993 359 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 SUCLG1P53597 346 aaKnown RBP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 EWSR1Q01844 656 aaKnown RBP eCLIP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF345Q14585 488 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 KCNMB1Q16558 191 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 SPATA46Q5T0L3 261 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 DCAF12Q5T6F0 453 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 TLNRD1Q9H1K6 362 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 PATZ1Q9HBE1 687 aaKnown RBP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 WFDC1Q9HC57 220 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 PURGQ9UJV8 347 aaKnown RBP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 A0A0G2JMM0 328 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 A0A1W2PPB8 328 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 A0A1W2PRS3 328 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 PINLYPA6NC86 204 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF98A6NK75 572 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 SLC22A20A6NK97 555 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 KIR3DP1A8MWS1 328 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 AREGP15514 252 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 NQO2P16083 231 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 PMCHP20382 165 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 S100PP25815 95 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 LPAR6P43657 344 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 CYB561P49447 251 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 QRFPP83859 136 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 HAGHQ16775 308 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 MRPL14Q6P1L8 145 aaKnown RBP4.28□□□□□ -1.72
SMAD4-202ENST00000398417 DNM1P46Q6ZS02 220 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 LILRB2Q8N423 598 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 B4GALT7Q9UBV7 327 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 SORL1Q92673 2214 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 LCTP09848 1927 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 TRDCB7Z8K6 153 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 RFPL3SP0C7P2 107 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF708P17019 499 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 F2RL1P55085 397 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM187Q14656 261 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ACER2Q5QJU3 275 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 C17orf78Q8N4C9 275 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ZIC4Q8N9L1 334 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 PHYHIPLQ96FC7 376 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 H3BP45 60 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 YKT6O15498 198 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ADAM20O43506 726 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 HINT1P49773 126 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-202ENST00000398417 LSM6P62312 80 aaKnown RBP4.28□□□□□ -1.72
SMAD4-202ENST00000398417 LCN15Q6UWW0 184 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 IL34Q6ZMJ4 242 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ARL6IP6Q8N6S5 226 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 PPP1R35Q8TAP8 253 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ASB13Q8WXK3 278 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 MRGPRFQ96AM1 343 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 TXN2Q99757 166 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 SLC25A31Q9H0C2 315 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 LUZP4Q9P127 313 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 CHCHD2Q9Y6H1 151 aaPredicted RBP4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ACKR3P25106 362 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 SRD5A2P31213 254 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 DEFA6Q01524 100 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 NHLH2Q02577 135 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF154Q13106 437 aa4.28□□□□□ -1.72
SMAD4-202ENST00000398417 MRPL49Q13405 166 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms