RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 DTD1Q8TEA8 209 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 C2orf15Q8WU43 125 aaKnown RBP1.3□□□□□ -2.2
CD47-203ENST00000398258 PDCD6IPQ8WUM4 868 aaKnown RBP1.3□□□□□ -2.2
CD47-203ENST00000398258 TWIST2Q8WVJ9 160 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 RBPMSQ93062 196 aaKnown RBP1.3□□□□□ -2.2
CD47-203ENST00000398258 DDIT4LQ96D03 193 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 ATP6V1G3Q96LB4 118 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 PGLYRP3Q96LB9 341 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 PKMYT1Q99640 499 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 ANAPC13Q9BS18 74 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 FAAP24Q9BTP7 215 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 OR2D2Q9H210 308 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 DSN1Q9H410 356 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 NRBP2Q9NSY0 501 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 MS4A12Q9NXJ0 267 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 ZNF391Q9UJN7 358 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 AK9Q5TCS8 1911 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 PIK3R4Q99570 1358 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 PTPRKQ15262 1439 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 ZSWIM8A7E2V4 1837 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 MIA3Q5JRA6 1907 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 IGKV1D-37A0A075B6S9 117 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 IGHV3OR15-7A0A075B7D8 119 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 LINC00854A0A1B0GVQ3 168 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 H3BMM0 161 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 FGF16O43320 207 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 KLHL2O95198 593 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 IGLV6-57P01721 117 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 GABRA1P14867 456 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 SPNP16150 400 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 PYCR1P32322 319 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 KDELR2P33947 212 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 BAMBIQ13145 260 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 IHHQ14623 411 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 PAFAH1B3Q15102 231 aaKnown RBP1.29□□□□□ -2.2
CD47-203ENST00000398258 KRTAP25-1Q3LHN0 102 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 NXNL2Q5VZ03 156 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 CYHR1Q6ZMK1 362 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 PAGE2Q7Z2X7 111 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 LYZL2Q7Z4W2 148 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 SELENOHQ8IZQ5 122 aaKnown RBP1.29□□□□□ -2.2
CD47-203ENST00000398258 KRTCAP2Q8N6L1 136 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 Q8NAQ8 132 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 GATD1Q8NB37 220 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 UBE2WQ96B02 151 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 CCDC127Q96BQ5 260 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 REEP6Q96HR9 211 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 FAM210AQ96ND0 272 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 TAPBPLQ9BX59 468 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 UGT2B28Q9BY64 529 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 ABCG5Q9H222 651 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 OR51E2Q9H255 320 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 SPACA1Q9HBV2 294 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 ASF1BQ9NVP2 202 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 TAS2R13Q9NYV9 303 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 POMPQ9Y244 141 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 URGCP-MRPS24S4R325 110 aa1.29□□□□□ -2.2
CD47-203ENST00000398258 LRPPRCP42704 1394 aaKnown RBP1.29□□□□□ -2.2
CD47-203ENST00000398258 ERICH2A1L162 156 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 OR5H14A6NHG9 310 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 GGTLC3B5MD39 225 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 SULT1C2O00338 296 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 GPR171O14626 319 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 TNFAIP8O95379 198 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 GPR75O95800 540 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 LTAP01374 205 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 CTLA4P16410 223 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 AKR1C4P17516 323 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 FUSP35637 526 aaKnown RBP eCLIP1.28□□□□□ -2.2
CD47-203ENST00000398258 CBX5P45973 191 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 STC1P52823 247 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 DEFB134Q4QY38 66 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 PYCR3Q53H96 274 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 ELP2Q6IA86 826 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 LAIR2Q6ISS4 152 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 HCP5Q6MZN7 132 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 FAM19A3Q7Z5A8 133 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 MTERF4Q7Z6M4 381 aaKnown RBP1.28□□□□□ -2.2
CD47-203ENST00000398258 SPATA24Q86W54 205 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 NIT1Q86X76 327 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 C10orf107Q8IVU9 208 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 FER1L6-AS1Q8NA97 138 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 LY6G5BQ8NDX9 201 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 OR5AK3PQ8NH89 298 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 DYNC2LI1Q8TCX1 351 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 RNASEH2CQ8TDP1 164 aaKnown RBP1.28□□□□□ -2.2
CD47-203ENST00000398258 KCTD4Q8WVF5 259 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 PPWD1Q96BP3 646 aaKnown RBP1.28□□□□□ -2.2
CD47-203ENST00000398258 LRRC45Q96CN5 670 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 MED10Q9BTT4 135 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 GABARAPL1Q9H0R8 117 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 ALX4Q9H161 411 aaPredicted RBP1.28□□□□□ -2.2
CD47-203ENST00000398258 ASCL3Q9NQ33 180 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 COMMD9Q9P000 198 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 CD300AQ9UGN4 299 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 FBXL3Q9UKT7 428 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 CFAP45Q9UL16 551 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 LINC00588Q9Y4M8 146 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 NACADO15069 1562 aa1.28□□□□□ -2.2
CD47-203ENST00000398258 PRR14LQ5THK1 2151 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms