RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TMEM11P17152 192 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 KIR3DL2P43630 455 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 CDX1P47902 265 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-208ENST00000397204 ISL1P61371 349 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 BNIP1Q12981 228 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 EBI3Q14213 229 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 HES1Q14469 280 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 KIR2DS1Q14954 304 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 C9orf66Q5T8R8 295 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 SLC35E3Q7Z769 313 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 STPG2Q8N412 459 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 DRAM1Q8N682 238 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 OR10H4Q8NGA5 316 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 OR10A7Q8NGE5 316 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 OR51T1Q8NGJ9 327 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 OR56B4Q8NH76 319 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 RFKQ969G6 155 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 RAX2Q96IS3 184 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 KIRREL1Q96J84 757 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 OPALINQ96PE5 141 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 MBOAT4Q96T53 435 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 OSBPL10Q9BXB5 764 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 BARHL1Q9BZE3 327 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 DCLRE1BQ9H816 532 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 PSG11Q9UQ72 335 aa6.89□□□□□ -1.31
CAPN3-208ENST00000397204 DYNC2H1Q8NCM8 4307 aaKnown RBP6.89□□□□□ -1.31
CAPN3-208ENST00000397204 HUWE1Q7Z6Z7 4374 aaKnown RBP6.89□□□□□ -1.31
CAPN3-208ENST00000397204 A0A1W2PPI3 338 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 NPIPB11E5RHQ5 1161 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 AP4M1O00189 453 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 RPSAP08865 295 aaKnown RBP6.88□□□□□ -1.31
CAPN3-208ENST00000397204 DBTP11182 482 aaKnown RBP6.88□□□□□ -1.31
CAPN3-208ENST00000397204 CCR9P51686 369 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 CDK5R1Q15078 307 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 TP53I3Q53FA7 332 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 UTF1Q5T230 341 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 KDM4DQ6B0I6 523 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 FAM220AQ7Z4H9 259 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 RNF152Q8N8N0 203 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 CCDC197Q8NCU1 140 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 OR5D14Q8NGL3 314 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 OR8J1Q8NGP2 316 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 OR5M8Q8NGP6 311 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 OR8U1Q8NH10 309 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 RFT1Q96AA3 541 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 ING3Q9NXR8 418 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 CALYQ9NYX4 217 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 IDI2-AS1Q9NZ38 188 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 LINC00527Q9UJ94 153 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 GNG8Q9UK08 70 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 POMPQ9Y244 141 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 SIRT4Q9Y6E7 314 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-208ENST00000397204 SORL1Q92673 2214 aa6.88□□□□□ -1.31
CAPN3-208ENST00000397204 RYR2Q92736 4967 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 hCG_2014768A0A024R1R8 64 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 MEIKINA0A087WXM9 373 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 LINC01548A6NM66 108 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 NCBP2LA6PVI3 153 aaKnown RBP6.87□□□□□ -1.31
CAPN3-208ENST00000397204 CCRL2O00421 344 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 GYG2O15488 501 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 MPZL2O60487 215 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 IL1AP01583 271 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 IGKV1D-33P01593 117 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 IGKV1-33P01594 117 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 GAPDHP04406 335 aaKnown RBP6.87□□□□□ -1.31
CAPN3-208ENST00000397204 ELANEP08246 267 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 TMEM225BP0DP42 221 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 GZMHP20718 246 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 CHATP28329 748 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 KCNJ3P48549 501 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 MTNR1BP49286 362 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 RAB25P57735 213 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 PAX5Q02548 391 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 ZNF85Q03923 595 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 ZNF816Q0VGE8 651 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-208ENST00000397204 FOXE3Q13461 319 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 GPR50Q13585 617 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 DNAL1Q4LDG9 190 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 CXorf66Q5JRM2 361 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-208ENST00000397204 ELP2Q6IA86 826 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 LCNL1Q6ZST4 164 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 TGIF2LXQ8IUE1 241 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 OR13A1Q8NGR1 328 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 OR10X1Q8NGY0 326 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 TRUB1Q8WWH5 349 aaKnown RBP6.87□□□□□ -1.31
CAPN3-208ENST00000397204 EME1Q96AY2 570 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 DUX3Q96PT4 197 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 ABCG5Q9H222 651 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 PPIL3Q9H2H8 161 aaKnown RBP6.87□□□□□ -1.31
CAPN3-208ENST00000397204 ZCCHC4Q9H5U6 513 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 LIN7CQ9NUP9 197 aaKnown RBP6.87□□□□□ -1.31
CAPN3-208ENST00000397204 SCOCQ9UIL1 159 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 KIF25Q9UIL4 384 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 MYRFQ9Y2G1 1151 aa6.87□□□□□ -1.31
CAPN3-208ENST00000397204 TRAV24A0A0B4J272 114 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 SEC14L6B5MCN3 397 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 H0YJX3 145 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 APOL3O95236 402 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 IGHV3-7P01780 117 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms