RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 TMEM38BQ9NVV0 291 aa12.7□□□□□ -0.38
CCNF-202ENST00000397066 HS3ST3B1Q9Y662 390 aa12.7□□□□□ -0.38
CCNF-202ENST00000397066 A0A087WWC5 75 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 ELOA3CA0A087WX78 387 aaPredicted RBP12.69□□□□□ -0.38
CCNF-202ENST00000397066 KIR2DS1A0A191URI9 304 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 C9J4A7 227 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 SYNGR3O43761 229 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 KIR2DS4P43632 304 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 IL24Q13007 206 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 GAMTQ14353 236 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 KIR2DS1Q14954 304 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 MRPL21Q7Z2W9 205 aaKnown RBP12.69□□□□□ -0.38
CCNF-202ENST00000397066 MKXQ8IYA7 352 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 CLDND2Q8NHS1 167 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 SGCZQ96LD1 299 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 CCDC74BQ96LY2 380 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 PACRGQ96M98 296 aaPredicted RBP12.69□□□□□ -0.38
CCNF-202ENST00000397066 RSG1Q9BU20 258 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 SRXN1Q9BYN0 137 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 PHOX2AO14813 284 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 PTBP3O95758 552 aaKnown RBP12.69□□□□□ -0.38
CCNF-202ENST00000397066 CST2P09228 141 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 LIFP15018 202 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 TAS2R30P59541 319 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 RDH5Q92781 318 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 ZNF665Q9H7R5 613 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 URB1O60287 2271 aaKnown RBP12.69□□□□□ -0.38
CCNF-202ENST00000397066 RPL36A-HNRNPH2H7BZ11 118 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 SOD3P08294 240 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 LBX1P52954 281 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 RAC1P63000 192 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 IZUMO4Q1ZYL8 232 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 RPS19BP1Q86WX3 136 aaKnown RBP12.69□□□□□ -0.38
CCNF-202ENST00000397066 OR5T1Q8NG75 326 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 FRZBQ92765 325 aa12.69□□□□□ -0.38
CCNF-202ENST00000397066 P04436 131 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 H3F3AP84243 136 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 PSMF1Q92530 271 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 MRPS17Q9Y2R5 130 aaKnown RBP12.68□□□□□ -0.38
CCNF-202ENST00000397066 IFNA10P01566 189 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 METTL15P1P0C7V9 234 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 PGA5P0DJD9 388 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 OR8G5Q8NG78 346 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 OR56B2PQ8NGI1 322 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 OR5B12Q96R08 314 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 OR2H1Q9GZK4 316 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 A0A087X0M5 115 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 A0A1B0GX30 115 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 CCL2P13500 99 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 IDH3GP51553 393 aaPredicted RBP12.68□□□□□ -0.38
CCNF-202ENST00000397066 ZNF732B4DXR9 585 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 CD63P08962 238 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 CRYGSP22914 178 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 SRYQ05066 204 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 TESK1Q15569 626 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 ZIC4Q8N9L1 334 aa12.68□□□□□ -0.38
CCNF-202ENST00000397066 ADAMTS9Q9P2N4 1935 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 A0A096LPE4 126 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 A0A1W2PPZ6 126 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 CBR3O75828 277 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 GPX4P36969 197 aaPredicted RBP12.67□□□□□ -0.38
CCNF-202ENST00000397066 HIST1H3AP68431 136 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 OR10J5Q8NHC4 309 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 OR51B6Q9H340 312 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 SLC39A9Q9NUM3 307 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 FOXD3Q9UJU5 478 aaPredicted RBP12.67□□□□□ -0.38
CCNF-202ENST00000397066 A0A1B0GV90 55 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 B4DEV8 164 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 TMEM56Q96MV1 263 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 SMIM7Q9BQ49 75 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 OCIAD1Q9NX40 245 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 TMEM56-RWDD3S4R434 201 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 IGKV1D-13A0A0B4J2D9 117 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 SLC22A20A6NK97 555 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 IGKV1-13P0DP09 117 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 MMP9P14780 707 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 RPUSD4Q96CM3 377 aaKnown RBP12.67□□□□□ -0.38
CCNF-202ENST00000397066 SSX3Q99909 188 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 CALHM2Q9HA72 323 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 PSENENQ9NZ42 101 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 ERRFI1Q9UJM3 462 aaPredicted RBP12.67□□□□□ -0.38
CCNF-202ENST00000397066 ZNF391Q9UJN7 358 aa12.67□□□□□ -0.38
CCNF-202ENST00000397066 IFITM10A6NMD0 228 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 HMGB3O15347 200 aaKnown RBP12.66□□□□□ -0.38
CCNF-202ENST00000397066 ZIC3O60481 467 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 CLDN15P56746 228 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 SPANXN5Q5MJ07 72 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 CPT1CQ8TCG5 803 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 PPP1R3CQ9UQK1 317 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 SPEGQ15772 3267 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 LOC102723971A0A1B0GUV8 181 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 C10orf142B7Z368 130 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 GDF9O60383 454 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 RBMXL2O75526 392 aaKnown RBP12.66□□□□□ -0.38
CCNF-202ENST00000397066 CTXN2P0C2S0 81 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 BCL2P10415 239 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 SRFP11831 508 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 HIST1H1BP16401 226 aaKnown RBP12.66□□□□□ -0.38
CCNF-202ENST00000397066 RAC3P60763 192 aa12.66□□□□□ -0.38
CCNF-202ENST00000397066 OR8G2PQ6IF36 304 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms