RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 ITGB1BP1O14713 200 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 DEGS1O15121 323 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 CRTAPO75718 401 aaPredicted RBP8.65□□□□□ -1.02
NUP98-205ENST00000397007 ELK1P19419 428 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 PRTN3P24158 256 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 PNLIPRP3Q17RR3 467 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 HACD4Q5VWC8 232 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 LINC00311Q8N616 119 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 OR56B1Q8NGI3 324 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 SMIM30A4D0T7 59 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 NDUFB3O43676 98 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 ENSAO43768 121 aaKnown RBP8.65□□□□□ -1.02
NUP98-205ENST00000397007 GSTP1P09211 210 aaKnown RBP8.65□□□□□ -1.02
NUP98-205ENST00000397007 GNB2P62879 340 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 MXD1Q05195 221 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 LRRC10Q5BKY1 277 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 C6orf201Q7Z4U5 140 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 ODF3L1Q8IXM7 274 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 GPER1Q99527 375 aa8.65□□□□□ -1.02
NUP98-205ENST00000397007 SDHCQ99643 169 aaPredicted RBP8.65□□□□□ -1.02
NUP98-205ENST00000397007 DNAH3Q8TD57 4116 aa8.65□□□□□ -1.03
NUP98-205ENST00000397007 SERPINE3A8MV23 424 aa8.65□□□□□ -1.03
NUP98-205ENST00000397007 SCGNO76038 276 aa8.65□□□□□ -1.03
NUP98-205ENST00000397007 DTYMKP23919 212 aa8.65□□□□□ -1.03
NUP98-205ENST00000397007 PDCD1Q15116 288 aa8.65□□□□□ -1.03
NUP98-205ENST00000397007 TMEM30BQ3MIR4 351 aa8.65□□□□□ -1.03
NUP98-205ENST00000397007 ESCO2Q56NI9 601 aa8.65□□□□□ -1.03
NUP98-205ENST00000397007 ZNF660Q6AZW8 331 aaPredicted RBP8.65□□□□□ -1.03
NUP98-205ENST00000397007 NLRC3Q7RTR2 1065 aa8.65□□□□□ -1.03
NUP98-205ENST00000397007 FAM216AQ8WUB2 273 aa8.65□□□□□ -1.03
NUP98-205ENST00000397007 DNAJB11Q9UBS4 358 aa8.65□□□□□ -1.03
NUP98-205ENST00000397007 CENPVL3A0A0U1RRI6 287 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 KBTBD11-OT1A0A1B0GTJ5 212 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 ZNF729A6NN14 1252 aaPredicted RBP8.64□□□□□ -1.03
NUP98-205ENST00000397007 SIRPB1O00241 398 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 LCN2P80188 198 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 HTD2P86397 168 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 ST6GALNAC6Q969X2 333 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 PPA2Q9H2U2 334 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 IGKV1D-8A0A087WSZ0 117 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 H3BUI4 141 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 IGHV1-8P0DP01 117 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 CDK2P24941 298 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 AESQ08117 197 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 BPIFB2Q8N4F0 458 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 GPX8Q8TED1 209 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 KIRREL1Q96J84 757 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 AUNIPQ9H7T9 357 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 HIF1ANQ9NWT6 349 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 GSTZ1O43708 216 aaPredicted RBP8.64□□□□□ -1.03
NUP98-205ENST00000397007 MPIG6BO95866 241 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 IGLV2-14P01704 120 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 FCGR3AP08637 254 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 GRK1Q15835 563 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 ZNF79Q15937 498 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 SNAPC3Q92966 411 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 FAM46BQ96A09 425 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 FAAP24Q9BTP7 215 aa8.64□□□□□ -1.03
NUP98-205ENST00000397007 BPIFB3P59826 476 aa8.63□□□□□ -1.03
NUP98-205ENST00000397007 IKZF1Q13422 519 aa8.63□□□□□ -1.03
NUP98-205ENST00000397007 GLCCI1Q86VQ1 547 aa8.63□□□□□ -1.03
NUP98-205ENST00000397007 PIP4P2Q8N4L2 257 aa8.63□□□□□ -1.03
NUP98-205ENST00000397007 AGMATQ9BSE5 352 aa8.63□□□□□ -1.03
NUP98-205ENST00000397007 CHST6Q9GZX3 395 aa8.63□□□□□ -1.03
NUP98-205ENST00000397007 GLS2Q9UI32 602 aa8.63□□□□□ -1.03
NUP98-205ENST00000397007 PTBP1P26599 531 aaKnown RBP eCLIP8.63□□□□□ -1.036e-9■■□□□ 13.9
NUP98-205ENST00000397007 ZNF626Q68DY1 528 aa8.63□□□□□ -1.03
NUP98-205ENST00000397007 BAIAP2L2Q6UXY1 529 aa8.63□□□□□ -1.03
NUP98-205ENST00000397007 MFSD4AQ8N468 514 aa8.63□□□□□ -1.03
NUP98-205ENST00000397007 BATF3Q9NR55 127 aa8.63□□□□□ -1.03
NUP98-205ENST00000397007 C12orf77C9JDV5 145 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 HPGDSO60760 199 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 FAM189A2Q15884 450 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 KRBOX4Q5JUW0 171 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 IDNKQ5T6J7 187 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 LAX1Q8IWV1 398 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 BEND2Q8NDZ0 799 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 URM1Q9BTM9 101 aaKnown RBP8.62□□□□□ -1.03
NUP98-205ENST00000397007 RIMS4Q9H426 269 aaPredicted RBP8.62□□□□□ -1.03
NUP98-205ENST00000397007 PLGRKTQ9HBL7 147 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 GAB2Q9UQC2 676 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 VEGFCP49767 419 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 VMO1Q7Z5L0 202 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 BOLLQ8N9W6 283 aaKnown RBP8.62□□□□□ -1.03
NUP98-205ENST00000397007 OR6Q1Q8NGQ2 317 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 ZNF48Q96MX3 618 aaPredicted RBP8.62□□□□□ -1.03
NUP98-205ENST00000397007 HDHD3Q9BSH5 251 aaPredicted RBP8.62□□□□□ -1.03
NUP98-205ENST00000397007 MMP27Q9H306 513 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 NARFLQ9H6Q4 476 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 OR14J1Q9UGF5 321 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 TMEM30CPA0ZSE6 113 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 TUSC2O75896 110 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 CSTBP04080 98 aaKnown RBP8.62□□□□□ -1.03
NUP98-205ENST00000397007 ZNF728P0DKX0 622 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 CCL3L1P16619 93 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 DYNLT3P51808 116 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 RPL31P62899 125 aaKnown RBP8.62□□□□□ -1.03
NUP98-205ENST00000397007 FAM120AOSQ5T036 256 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 TRAT1Q6PIZ9 186 aa8.62□□□□□ -1.03
NUP98-205ENST00000397007 BRICD5Q6PL45 260 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms