RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ZIK1Q3SY52 487 aaPredicted RBP12.33□□□□□ -0.44
SNCA-205ENST00000394991 RDH10Q8IZV5 341 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 CCDC54Q8NEL0 328 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 OR11H1Q8NG94 326 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 PP6455Q8WZ26 134 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 C10orf35Q96D05 121 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 S100A14Q9HCY8 104 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 IDI2-AS1Q9NZ38 188 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 OR6C3Q9NZP0 311 aa12.33□□□□□ -0.44
SNCA-205ENST00000394991 NCBP2LA6PVI3 153 aaKnown RBP12.32□□□□□ -0.44
SNCA-205ENST00000394991 IGHG4P01861 327 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 ALPLP05186 524 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 INSL3P51460 131 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 LHFPL2Q6ZUX7 228 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 UTS2BQ765I0 119 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 GID4Q8IVV7 300 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 IZUMO1Q8IYV9 350 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 CBR4Q8N4T8 237 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 CHST4Q8NCG5 386 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 OR5D18Q8NGL1 313 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 MYOZ3Q8TDC0 251 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 RNF166Q96A37 237 aaPredicted RBP12.32□□□□□ -0.44
SNCA-205ENST00000394991 SPACA5Q96QH8 159 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 HSPB9Q9BQS6 159 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 ADI1Q9BV57 179 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 GON7Q9BXV9 100 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 LINC00574Q9H8X3 128 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 KIF25Q9UIL4 384 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 HYDINQ4G0P3 5121 aa12.32□□□□□ -0.44
SNCA-205ENST00000394991 IGHV1-3A0A0C4DH29 117 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 A0A1W2PPE3 182 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 METTL15A6NJ78 407 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 HSPB6O14558 160 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 HSD17B6O14756 317 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 BAG2O95816 211 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 IL1AP01583 271 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 PRKACBP22694 351 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 PSMB8P28062 276 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 REG1BP48304 166 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 ALDH3A2P51648 485 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 ZNF816Q0VGE8 651 aaPredicted RBP12.31□□□□□ -0.44
SNCA-205ENST00000394991 CDK5R1Q15078 307 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 MOB3BQ86TA1 216 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 OR51T1Q8NGJ9 327 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 OR8J1Q8NGP2 316 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 HAVCR2Q8TDQ0 301 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
SNCA-205ENST00000394991 OPALINQ96PE5 141 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 ZMAT4Q9H898 229 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 EDA2RQ9HAV5 297 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 ISYNA1Q9NPH2 558 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 PLSCR3Q9NRY6 295 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 IMPAD1Q9NX62 359 aa12.31□□□□□ -0.44
SNCA-205ENST00000394991 A0A1W2PQL4 384 aaPredicted RBP12.3□□□□□ -0.44
SNCA-205ENST00000394991 TRIM64CA6NLI5 447 aa12.3□□□□□ -0.44
SNCA-205ENST00000394991 NPIPB11E5RHQ5 1161 aa12.3□□□□□ -0.44
SNCA-205ENST00000394991 APOL3O95236 402 aa12.3□□□□□ -0.44
SNCA-205ENST00000394991 SPNP16150 400 aa12.3□□□□□ -0.44
SNCA-205ENST00000394991 ATP6V1E1P36543 226 aa12.3□□□□□ -0.44
SNCA-205ENST00000394991 RFESDQ8TAC1 157 aa12.3□□□□□ -0.44
SNCA-205ENST00000394991 SPSB1Q96BD6 273 aa12.3□□□□□ -0.44
SNCA-205ENST00000394991 FGGYQ96C11 551 aa12.3□□□□□ -0.44
SNCA-205ENST00000394991 RNFT2Q96EX2 444 aa12.3□□□□□ -0.44
SNCA-205ENST00000394991 TM2D3Q9BRN9 247 aa12.3□□□□□ -0.44
SNCA-205ENST00000394991 C9orf16Q9BUW7 83 aa12.3□□□□□ -0.44
SNCA-205ENST00000394991 GNB4Q9HAV0 340 aa12.3□□□□□ -0.44
SNCA-205ENST00000394991 WARS2Q9UGM6 360 aaKnown RBP12.3□□□□□ -0.44
SNCA-205ENST00000394991 MEIKINA0A087WXM9 373 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 I3L521 148 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 DEGS1O15121 323 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 RRP9O43818 475 aaKnown RBP12.29□□□□□ -0.44
SNCA-205ENST00000394991 MPZL2O60487 215 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 OR8U8P0C7N1 319 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 UBCP0CG48 685 aaKnown RBP12.29□□□□□ -0.44
SNCA-205ENST00000394991 HTR1FP30939 366 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 SSTR5P35346 364 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 ISL1P61371 349 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 KIAA0141Q14154 515 aaPredicted RBP12.29□□□□□ -0.44
SNCA-205ENST00000394991 FAM27D1Q5T7N8 215 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 FAM53AQ6NSI3 398 aaPredicted RBP12.29□□□□□ -0.44
SNCA-205ENST00000394991 PQLC1Q8N2U9 271 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 TMEM104Q8NE00 496 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 OR10X1Q8NGY0 326 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 OR2T10Q8NGZ9 312 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 MRGPRDQ8TDS7 321 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 EME1Q96AY2 570 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 KCTD7Q96MP8 289 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 TNCP24821 2201 aa12.29□□□□□ -0.44
SNCA-205ENST00000394991 TRAV39A0A0B4J263 110 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 TRAV24A0A0B4J272 114 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 H0YJX3 145 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 SULT1C4O75897 302 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 GAPDHP04406 335 aaKnown RBP12.28□□□□□ -0.44
SNCA-205ENST00000394991 VDAC1P21796 283 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 GNB1P62873 340 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 RSBN1Q5VWQ0 802 aaPredicted RBP12.28□□□□□ -0.44
SNCA-205ENST00000394991 ZNF429Q86V71 674 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 ZNF565Q8N9K5 539 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 OR10H4Q8NGA5 316 aa12.28□□□□□ -0.44
SNCA-205ENST00000394991 OR1N2Q8NGR9 330 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms