RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 CXorf67Q86X51 503 aaPredicted RBP13.97□□□□□ -0.17
PCDH1-203ENST00000394536 FAM89BQ8N5H3 189 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 CNEP1R1Q8N9A8 125 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 RSG1Q9BU20 258 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 SRSF4Q08170 494 aaKnown RBP13.96□□□□□ -0.17
PCDH1-203ENST00000394536 HABP2Q14520 560 aaPredicted RBP13.96□□□□□ -0.17
PCDH1-203ENST00000394536 SSX9Q7RTT3 188 aa13.96□□□□□ -0.17
PCDH1-203ENST00000394536 FAM185AQ8N0U4 392 aa13.96□□□□□ -0.17
PCDH1-203ENST00000394536 UBE2L5PA0A1B0GUS4 154 aa13.96□□□□□ -0.17
PCDH1-203ENST00000394536 A0A1W2PPQ1 181 aa13.96□□□□□ -0.17
PCDH1-203ENST00000394536 TRDCB7Z8K6 153 aa13.96□□□□□ -0.17
PCDH1-203ENST00000394536 RND3P61587 244 aa13.96□□□□□ -0.17
PCDH1-203ENST00000394536 DEFB127Q9H1M4 99 aa13.96□□□□□ -0.17
PCDH1-203ENST00000394536 PCED1AQ9H1Q7 454 aa13.96□□□□□ -0.17
PCDH1-203ENST00000394536 HS3ST3B1Q9Y662 390 aa13.96□□□□□ -0.17
PCDH1-203ENST00000394536 PRRC2CQ9Y520 2896 aaKnown RBP13.96□□□□□ -0.17
PCDH1-203ENST00000394536 GABRA2P47869 451 aa13.96□□□□□ -0.18
PCDH1-203ENST00000394536 MLF1P58340 268 aa13.96□□□□□ -0.18
PCDH1-203ENST00000394536 CLDN23Q96B33 292 aa13.96□□□□□ -0.18
PCDH1-203ENST00000394536 C1orf147Q96MC9 270 aaPredicted RBP13.96□□□□□ -0.18
PCDH1-203ENST00000394536 WFDC1Q9HC57 220 aa13.96□□□□□ -0.18
PCDH1-203ENST00000394536 LAMP3Q9UQV4 416 aa13.96□□□□□ -0.18
PCDH1-203ENST00000394536 TOX3O15405 576 aaPredicted RBP13.95□□□□□ -0.18
PCDH1-203ENST00000394536 CDS2O95674 445 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 ZNF816Q0VGE8 651 aaPredicted RBP13.95□□□□□ -0.18
PCDH1-203ENST00000394536 SPINK9Q5DT21 86 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 NSUN5P2Q63ZY6 315 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 OR2Y1Q8NGV0 311 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 KCNE4Q8WWG9 221 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 FAM210BQ96KR6 192 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 GPR35Q9HC97 309 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 WASF3Q9UPY6 502 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 CLEC18AA5D8T8 446 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 H7BYZ3 331 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 CST2P09228 141 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 CFPP27918 469 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 SRD5A2P31213 254 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 TUSC5Q8IXB3 177 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 MRPL41Q8IXM3 137 aaKnown RBP13.95□□□□□ -0.18
PCDH1-203ENST00000394536 CLEC18CQ8NCF0 446 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 C10orf35Q96D05 121 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 ADGRG7Q96K78 797 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 TRIOO75962 3097 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 A0A1W2PPE3 182 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 IFNA10P01566 189 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 CCL20P78556 96 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 TMEM211Q6ICI0 200 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 OR4F5Q8NH21 305 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 OR4F4Q96R69 305 aa13.95□□□□□ -0.18
PCDH1-203ENST00000394536 A0A1W2PPV4 95 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 MMP9P14780 707 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 HLA-DRB3P79483 266 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 EDDM3AQ14507 147 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 IL11RAQ14626 422 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 ZNF880Q6PDB4 577 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 MOB3AQ96BX8 217 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 CACNA1HO95180 2353 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 TRGC2P03986 189 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 RFPL3SP0C7P2 107 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 DOCK11Q5JSL3 2073 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 RFESDQ8TAC1 157 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 TMEM37Q8WXS4 190 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 TM2D1Q9BX74 207 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 TMEM222Q9H0R3 208 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 PNRC2Q9NPJ4 139 aaKnown RBP13.94□□□□□ -0.18
PCDH1-203ENST00000394536 C3orf80F5H4A9 247 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 ZIC3O60481 467 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 PSG2P11465 335 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 APOBEC3DQ96AK3 386 aaPredicted RBP13.94□□□□□ -0.18
PCDH1-203ENST00000394536 SNX22Q96L94 193 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 IL36RNQ9UBH0 155 aa13.94□□□□□ -0.18
PCDH1-203ENST00000394536 PQLC2LA1A4F0 135 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 IGSF23A1L1A6 192 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 PPP5D1E7EU14 171 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 CD5P06127 495 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 ZNF573Q86YE8 665 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 ZNF665Q9H7R5 613 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 CADP27708 2225 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 BTBD17A6NE02 478 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 SERPINA7P05543 415 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 PSMB3P49720 205 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 PCOLCEQ15113 449 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 MSMO1Q15800 293 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 ZNF818PQ6ZRF7 136 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 C17orf82Q86X59 251 aaPredicted RBP13.93□□□□□ -0.18
PCDH1-203ENST00000394536 FAM58AQ8N1B3 248 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 ABCA1O95477 2261 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 C2orf16Q68DN1 1984 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 SYNGR1O43759 233 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 LINC00469Q8N7U9 141 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 NANOS1Q8WY41 292 aaKnown RBP13.93□□□□□ -0.18
PCDH1-203ENST00000394536 MALSU1Q96EH3 234 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 SLC25A22Q9H936 323 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 GSN-AS1Q9NRJ2 163 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 V9GYS6 101 aa13.93□□□□□ -0.18
PCDH1-203ENST00000394536 THADAQ6YHU6 1953 aa13.92□□□□□ -0.18
PCDH1-203ENST00000394536 ZNF705FA8MVS1 300 aaPredicted RBP13.92□□□□□ -0.18
PCDH1-203ENST00000394536 ZNF705DP0CH99 300 aaPredicted RBP13.92□□□□□ -0.18
PCDH1-203ENST00000394536 ZNF705BP0CI00 300 aaPredicted RBP13.92□□□□□ -0.18
PCDH1-203ENST00000394536 HNF1AP20823 631 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms