RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 FAM71F1Q96KD3 344 aaPredicted RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF681Q96N22 645 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 GFI1Q99684 422 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 PSMG3Q9BT73 122 aaPredicted RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 CRISPLD2Q9H0B8 497 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 MRPL18Q9H0U6 180 aaKnown RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 OR1A1Q9P1Q5 309 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 RBBP6Q7Z6E9 1792 aaKnown RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 HYPMO75409 117 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 CLDN1O95832 211 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 PMP22Q01453 160 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 MEF2BQ02080 365 aaPredicted RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 C1orf61Q13536 156 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 RUNX2Q13950 521 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 PCK2Q16822 640 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 RNASEKQ6P5S7 137 aaKnown RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 Q6ZNB5 142 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 OR1B1Q8NGR6 318 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 RNF133Q8WVZ7 376 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 ANKRD10Q9NXR5 420 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF319Q9P2F9 582 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 LRIT1Q9P2V4 623 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 C17orf112F2Z3M2 114 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 NEURL1O76050 574 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 RPS21P63220 83 aaKnown RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF77Q15935 545 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 COA6Q5JTJ3 125 aaKnown RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 CYP2G1PQ6ZSU1 146 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 LYZL2Q7Z4W2 148 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 RTN4RL2Q86UN3 420 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 GATSQ8NAP1 163 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 OR5A2Q8NGI9 324 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 OR10G8Q8NGN5 311 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 TSACCQ96A04 125 aaPredicted RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 RAB37Q96AX2 223 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 SLC35A4Q96G79 324 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 TMEM56Q96MV1 263 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 TMEM191AQ9H0A3 160 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 NRN1Q9NPD7 142 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 CUTCQ9NTM9 273 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 MRPS16Q9Y3D3 137 aaKnown RBP6.69□□□□□ -1.34
VTI1A-201ENST00000393077 TMEM56-RWDD3S4R434 201 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 ARID2Q68CP9 1835 aa6.69□□□□□ -1.34
VTI1A-201ENST00000393077 OR2T8A6NH00 312 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 J3QRE1 110 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 KBTBD11O94819 623 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 C1orf105O95561 183 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 CEACAM3P40198 252 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 RABIFP47224 123 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 OR51G1Q8NGK1 321 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 GUCD1Q96NT3 240 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 SLC5A6Q9Y289 635 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 PIGBOS1A0A0B4J2F0 54 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 HSPB2A8KAH6 182 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 SOX1O00570 391 aaPredicted RBP6.68□□□□□ -1.34
VTI1A-201ENST00000393077 SAP30O75446 220 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 IGLC2P0DOY2 106 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 IGLC3P0DOY3 106 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 ERGP11308 486 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 HIST1H1DP16402 221 aaKnown RBP6.68□□□□□ -1.34
VTI1A-201ENST00000393077 CBLN1P23435 193 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 CD1BP29016 333 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 OPRM1P35372 400 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 CDKN2AP42771 156 aaKnown RBP6.68□□□□□ -1.34
VTI1A-201ENST00000393077 HSPB2Q16082 182 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 TMEM177Q53S58 311 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 MPV17L2Q567V2 206 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 HOXB13Q92826 284 aaPredicted RBP6.68□□□□□ -1.34
VTI1A-201ENST00000393077 LMF2Q9BU23 707 aaKnown RBP6.68□□□□□ -1.34
VTI1A-201ENST00000393077 PLSCR4Q9NRQ2 329 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 NECAP2Q9NVZ3 263 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 DOCK9Q9BZ29 2069 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 TMEM202A6NGA9 273 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 A6NJY4 79 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 FAM157AC9JC47 383 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 K7ESM1 405 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 SLC17A3O00476 420 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 B3GALT2O43825 422 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 MTCP1P56278 107 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 TDRG1Q3Y452 100 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF260Q3ZCT1 412 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 KRTCAP3Q53RY4 240 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 PARM1Q6UWI2 310 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 TEX43Q6ZNM6 134 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 C19orf35Q6ZS72 473 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 LHFPL4Q7Z7J7 247 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 CALHM1Q8IU99 346 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 CDRT4Q8N9R6 151 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 OR4S2Q8NH73 311 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 OR2D2Q9H210 308 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF442Q9H7R0 627 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 CALHM2Q9HA72 323 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 PLEK2Q9NYT0 353 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 MRPS18BQ9Y676 258 aaKnown RBP6.68□□□□□ -1.34
VTI1A-201ENST00000393077 LOC285556D6RIA3 1793 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 SEC16AO15027 2179 aa6.68□□□□□ -1.34
VTI1A-201ENST00000393077 ZNF646O15015 1829 aaPredicted RBP6.67□□□□□ -1.34
VTI1A-201ENST00000393077 LOC105371242A0A075B767 164 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 TRBV5-5A0A0J9YX44 114 aa6.67□□□□□ -1.34
VTI1A-201ENST00000393077 IFNL4K9M1U5 179 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms