RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 DYNLT3P51808 116 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 HABP2Q14520 560 aaPredicted RBP14.38□□□□□ -0.11
SCN3B-202ENST00000392770 ASCL5Q7RTU5 278 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 WNT5BQ9H1J7 359 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 NPTNQ9Y639 398 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 SCO1O75880 301 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 TMEM33P57088 247 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 TAGLNQ01995 201 aaKnown RBP14.38□□□□□ -0.11
SCN3B-202ENST00000392770 ZNF260Q3ZCT1 412 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 C10orf128Q5T292 105 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 GZMHP20718 246 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 FGF12P61328 243 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 FDCSPQ8NFU4 85 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 MITD1Q8WV92 249 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 ZNRF4Q8WWF5 429 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 CXorf58Q96LI9 332 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 WIPI2Q9Y4P8 454 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 NPIPB13A6NJU9 1138 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 NPIPB4C9JG80 1138 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 C1orf174Q8IYL3 243 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 C9orf62Q8N4C0 152 aa14.38□□□□□ -0.11
SCN3B-202ENST00000392770 GFRA3O60609 400 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 LRRC75AQ8NAA5 344 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 ZDHHC16Q969W1 377 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 H7BYZ3 331 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 RBP4P02753 201 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 OR2B8PP59922 312 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 C1orf100Q5SVJ3 147 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 UQCC3Q6UW78 93 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 FADS6Q8N9I5 356 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 HES4Q9HCC6 221 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 MED19A0JLT2 244 aaPredicted RBP14.37□□□□□ -0.11
SCN3B-202ENST00000392770 RIPPLY2Q5TAB7 128 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 ADAMTS17Q8TE56 1095 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 SCMH1Q96GD3 660 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 ADTRPQ96IZ2 230 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 IL36GQ9NZH8 169 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 OPN4Q9UHM6 478 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 NLRC5Q86WI3 1866 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 IGLV3-12A0A075B6K2 115 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 NEIL1Q96FI4 390 aaPredicted RBP14.37□□□□□ -0.11
SCN3B-202ENST00000392770 TIMP4Q99727 224 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 PATZ1Q9HBE1 687 aaKnown RBP14.37□□□□□ -0.11
SCN3B-202ENST00000392770 SFTPCP11686 197 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 RPL7L1Q6DKI1 246 aaKnown RBP14.37□□□□□ -0.11
SCN3B-202ENST00000392770 BPIFCQ8NFQ6 507 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 TVP23CQ96ET8 276 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 TIMM9Q9Y5J7 89 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 TANC1Q9C0D5 1861 aa14.37□□□□□ -0.11
SCN3B-202ENST00000392770 LY86O95711 162 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 ZP3P21754 424 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 LYZL2Q7Z4W2 148 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 BAGE3Q86Y29 109 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 BAGE2Q86Y30 109 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 OR13D1Q8NGV5 346 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 IMMP1LQ96LU5 166 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 SCN2AQ99250 2005 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 CA11O75493 328 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 VSIG10L2P0DP72 767 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 GUK1Q16774 197 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 FDX2Q6P4F2 183 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 AQP3Q92482 292 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 OR51I2Q9H344 312 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 SCGB1D1O95968 90 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 PRDX2P32119 198 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 ADAM5Q6NVV9 412 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 MS4A5Q9H3V2 200 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 CFHR1Q03591 330 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 SLC35D1Q9NTN3 355 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 CACNA1CQ13936 2221 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 A0A1W2PRD5 423 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 A0A1W2PRF3 423 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 A0A1W2PRM7 423 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 PSG2P11465 335 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 CTSSP25774 331 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 SSTP61278 116 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 C19orf57Q0VDD7 668 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 FAM219AQ8IW50 185 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 PHYHIPLQ96FC7 376 aa14.36□□□□□ -0.11
SCN3B-202ENST00000392770 ZIC3O60481 467 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 ETV3LQ6ZN32 361 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 MOB3AQ96BX8 217 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 IGKV1D-43A0A0B4J1Z2 117 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 NKX2-6A6NCS4 301 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 SYNGR1O43759 233 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 CHST1O43916 411 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 ADAM11O75078 769 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 Q56UQ5 140 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 NCR3LG1Q68D85 454 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 ZNF835Q9Y2P0 537 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 UNC13CQ8NB66 2214 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 HOXA6P31267 233 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 G6PCP35575 357 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 ZNF90Q03938 601 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 PRDM14Q9GZV8 571 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 CKAP5Q14008 2032 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 SYNGR2O43760 224 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 AKR1C3P42330 323 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 ARL16Q0P5N6 197 aa14.35□□□□□ -0.11
SCN3B-202ENST00000392770 GYPAP02724 150 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms