RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 FRRS1LQ9P0K9 344 aa16.43■□□□□ 0.22
CCDC50-202ENST00000392456 H3BSH0 61 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 PIN1P1O15428 100 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 SLC18B1Q6NT16 456 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 STEAP1BQ6NZ63 245 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 SNIP1Q8TAD8 396 aaKnown RBP16.42■□□□□ 0.22
CCDC50-202ENST00000392456 FNDC9Q8TBE3 224 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 ORAOV1Q8WV07 137 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 TMEM14AQ9Y6G1 99 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 EEF1E1-BLOC1S5C9J1V9 151 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 H0YIZ8 118 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 ZNF823P16415 610 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 PCK2Q16822 640 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 MIDNQ504T8 468 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 RPL22L1Q6P5R6 122 aaKnown RBP16.42■□□□□ 0.22
CCDC50-202ENST00000392456 DVL3Q92997 716 aaPredicted RBP16.42■□□□□ 0.22
CCDC50-202ENST00000392456 OR8B4Q96RC9 309 aa16.42■□□□□ 0.22
CCDC50-202ENST00000392456 FOXD3Q9UJU5 478 aaPredicted RBP16.42■□□□□ 0.22
CCDC50-202ENST00000392456 DOK2O60496 412 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 SCAF4O95104 1147 aaKnown RBP16.41■□□□□ 0.22
CCDC50-202ENST00000392456 OR13C7P0DN81 318 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 CALCBP10092 127 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 CSNK1A1P48729 337 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 SPACA3Q8IXA5 215 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 TMEM127O75204 238 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 CD1AP06126 327 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 CTXN2P0C2S0 81 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 ZBTB25P24278 435 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 BATFQ16520 125 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 TMEM54Q969K7 222 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 SLC5A7Q9GZV3 580 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 SLC25A18Q9H1K4 315 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 SSUH2Q9Y2M2 353 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 MSRB2Q9Y3D2 182 aa16.41■□□□□ 0.22
CCDC50-202ENST00000392456 DOCK7Q96N67 2140 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 RP1L1Q8IWN7 2480 aaPredicted RBP16.4■□□□□ 0.22
CCDC50-202ENST00000392456 HPRT1P00492 218 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 IFNA6P05013 189 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 TAGLN2P37802 199 aaKnown RBP16.4■□□□□ 0.22
CCDC50-202ENST00000392456 GUCA2AQ02747 115 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 COA6Q5JTJ3 125 aaKnown RBP16.4■□□□□ 0.22
CCDC50-202ENST00000392456 RPL7L1Q6DKI1 246 aaKnown RBP16.4■□□□□ 0.22
CCDC50-202ENST00000392456 ZNF433Q8N7K0 673 aaPredicted RBP16.4■□□□□ 0.22
CCDC50-202ENST00000392456 OR10S1Q8NGN2 331 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 RPS4Y2Q8TD47 263 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 RAB39BQ96DA2 213 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 VAX2Q9UIW0 290 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 LHFPL6Q9Y693 200 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 TRGV5A0A0B4J1U4 118 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 TRAV17A0A0B4J275 112 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 TACSTD2P09758 323 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 NBEAP1P0C6P0 100 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 UBE2KP61086 200 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 FAM220AQ7Z4H9 259 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 LYG2Q86SG7 212 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 MRPL41Q8IXM3 137 aaKnown RBP16.4■□□□□ 0.22
CCDC50-202ENST00000392456 ZNF679Q8IYX0 411 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 C1orf87Q8N0U7 546 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 OR52N5Q8NH56 324 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 MITD1Q8WV92 249 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 AQP10Q96PS8 301 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 V9GY05 133 aa16.4■□□□□ 0.22
CCDC50-202ENST00000392456 ROM1Q03395 351 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 UBE2V1Q13404 147 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 C20orf196Q8IYI0 205 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 GBGT1Q8N5D6 347 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 OR10AC1Q8NH08 325 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 OR8S1Q8NH09 359 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 DCBLD2Q96PD2 775 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 TAAR6Q96RI8 345 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 MIEN1Q9BRT3 115 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 RBM24Q9BX46 236 aaKnown RBP16.39■□□□□ 0.21
CCDC50-202ENST00000392456 SLC22A13Q9Y226 551 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 LRP12Q9Y561 859 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 NDUFB8O95169 186 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 IGHV3-9P01782 118 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 MFGE8Q08431 387 aaPredicted RBP16.39■□□□□ 0.21
CCDC50-202ENST00000392456 ZNF616Q08AN1 781 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 SOHLH1Q5JUK2 328 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 Q5PR19 223 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 WDYHV1Q96HA8 205 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 PGAM5Q96HS1 289 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 CENPMQ9NSP4 180 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 ETV7Q9Y603 341 aa16.39■□□□□ 0.21
CCDC50-202ENST00000392456 OR5H8P0DN80 308 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 OR51A4Q8NGJ6 313 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 TLN1Q9Y490 2541 aaKnown RBP16.38■□□□□ 0.21
CCDC50-202ENST00000392456 MEIS3P1A6NDR6 274 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 OR4C45A6NMZ5 311 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 M0QZ24 198 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 AQP7O14520 342 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 RER1O15258 196 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 IL2RAP01589 272 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 LYL1P12980 280 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 WDR38Q5JTN6 314 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 AAED1Q7RTV5 226 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 TUSC5Q8IXB3 177 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 RNF128Q8TEB7 428 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 SLC35E1Q96K37 410 aa16.38■□□□□ 0.21
CCDC50-202ENST00000392456 RNF150Q9ULK6 438 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms