RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 SLC33A1O00400 549 aaPredicted RBP16.19■□□□□ 0.18
ERCC2-203ENST00000391944 ZNF718Q3SXZ3 478 aa16.19■□□□□ 0.18
ERCC2-203ENST00000391944 PAN3Q58A45 887 aaKnown RBP16.19■□□□□ 0.18
ERCC2-203ENST00000391944 PTPRZ1P23471 2315 aaPredicted RBP16.19■□□□□ 0.18
ERCC2-203ENST00000391944 GPR31O00270 319 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 ZNF250P15622 560 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 TIMP3P35625 211 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 HLA-DRB3P79483 266 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 SNTB1Q13884 538 aaKnown RBP16.18■□□□□ 0.18
ERCC2-203ENST00000391944 KRTCAP3Q53RY4 240 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 FAM74A1Q5RGS3 127 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 FOXRED2Q8IWF2 684 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 SLC5A7Q9GZV3 580 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 LUZP4Q9P127 313 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 FBXO9Q9UK97 447 aaPredicted RBP16.18■□□□□ 0.18
ERCC2-203ENST00000391944 IGKV1D-13A0A0B4J2D9 117 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 IGHV3-64DA0A0J9YX35 117 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 MKRN2OSH3BPM6 223 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 SIRPB1O00241 398 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 SH2D1BO14796 132 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 DEDDO75618 318 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 IGKV1-13P0DP09 117 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 TPT1P13693 172 aaKnown RBP16.18■□□□□ 0.18
ERCC2-203ENST00000391944 SPIN3Q5JUX0 258 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 ZNF497Q6ZNH5 498 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 GAPTQ8N292 157 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 RPRMLQ8N4K4 120 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 LHFPL5Q8TAF8 219 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 CXXC4Q9H2H0 198 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 HES4Q9HCC6 221 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 WASF3Q9UPY6 502 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 SSUH2Q9Y2M2 353 aa16.18■□□□□ 0.18
ERCC2-203ENST00000391944 TIMM8AO60220 97 aaPredicted RBP16.17■□□□□ 0.18
ERCC2-203ENST00000391944 FABP6P51161 128 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 SRPXP78539 464 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 MBNL2Q5VZF2 373 aaKnown RBP16.17■□□□□ 0.18
ERCC2-203ENST00000391944 ZNF474Q6S9Z5 364 aaPredicted RBP16.17■□□□□ 0.18
ERCC2-203ENST00000391944 ZNF818PQ6ZRF7 136 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 TBC1D26Q86UD7 250 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 C11orf53Q8IXP5 236 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 CABLES2Q9BTV7 478 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 TMEM222Q9H0R3 208 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 TMED3Q9Y3Q3 217 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 ARID1AO14497 2285 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 GCH1P30793 250 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 SMCO1Q147U7 214 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 MOB1BQ7L9L4 216 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 CCDC28AQ8IWP9 274 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 BAP18Q8IXM2 172 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 SPERTQ8NA61 448 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 OR10J5Q8NHC4 309 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 PLPPR1Q8TBJ4 325 aa16.17■□□□□ 0.18
ERCC2-203ENST00000391944 HEATR1Q9H583 2144 aaKnown RBP16.17■□□□□ 0.18
ERCC2-203ENST00000391944 A0A1B0GW55 424 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 SHOXO15266 292 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 DUX4L2P0CJ85 424 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 DUX4L3P0CJ86 424 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 DUX4L4P0CJ87 422 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 DUX4L5P0CJ88 424 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 DUX4L6P0CJ89 424 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 DUX4L7P0CJ90 424 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 HKR1P10072 659 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 ZNF324BQ6AW86 544 aaPredicted RBP16.16■□□□□ 0.18
ERCC2-203ENST00000391944 Q6ZR03 302 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 TLNRD1Q9H1K6 362 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 DUX4Q9UBX2 424 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 FZR1Q9UM11 496 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 C1QTNF9BB2RNN3 333 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 MBPP02686 304 aaPredicted RBP16.16■□□□□ 0.18
ERCC2-203ENST00000391944 TIMM23BQ5SRD1 257 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 H1FOOQ8IZA3 346 aaPredicted RBP16.16■□□□□ 0.18
ERCC2-203ENST00000391944 TMEM56Q96MV1 263 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 CCL28Q9NRJ3 127 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 OR2W1Q9Y3N9 320 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 TMEM56-RWDD3S4R434 201 aa16.16■□□□□ 0.18
ERCC2-203ENST00000391944 A0A1B0GWJ7 208 aa16.15■□□□□ 0.18
ERCC2-203ENST00000391944 TMEM268Q5VZI3 342 aa16.15■□□□□ 0.18
ERCC2-203ENST00000391944 FIP1L1Q6UN15 594 aaKnown RBP16.15■□□□□ 0.18
ERCC2-203ENST00000391944 MEX3BQ6ZN04 569 aaKnown RBP16.15■□□□□ 0.18
ERCC2-203ENST00000391944 SLC35G3Q8N808 338 aa16.15■□□□□ 0.18
ERCC2-203ENST00000391944 FAM57AQ8TBR7 257 aa16.15■□□□□ 0.18
ERCC2-203ENST00000391944 LSM5Q9Y4Y9 91 aaKnown RBP16.15■□□□□ 0.18
ERCC2-203ENST00000391944 ANKRD11Q6UB99 2663 aaPredicted RBP16.15■□□□□ 0.18
ERCC2-203ENST00000391944 NPIPB11E5RHQ5 1161 aa16.14■□□□□ 0.18
ERCC2-203ENST00000391944 TAAR5O14804 337 aa16.14■□□□□ 0.18
ERCC2-203ENST00000391944 HOXD4P09016 255 aaPredicted RBP16.14■□□□□ 0.18
ERCC2-203ENST00000391944 RPL12P30050 165 aaKnown RBP16.14■□□□□ 0.18
ERCC2-203ENST00000391944 CEACAM8P31997 349 aaPredicted RBP16.14■□□□□ 0.18
ERCC2-203ENST00000391944 FAM180AQ6UWF9 173 aa16.14■□□□□ 0.18
ERCC2-203ENST00000391944 ZNF826PQ6ZT77 177 aa16.14■□□□□ 0.18
ERCC2-203ENST00000391944 HSD17B13Q7Z5P4 300 aaPredicted RBP16.14■□□□□ 0.18
ERCC2-203ENST00000391944 CMTM1Q8IZ96 169 aa16.14■□□□□ 0.18
ERCC2-203ENST00000391944 EIF4E3Q8N5X7 224 aaKnown RBP16.14■□□□□ 0.18
ERCC2-203ENST00000391944 KIRREL1Q96J84 757 aa16.14■□□□□ 0.18
ERCC2-203ENST00000391944 COL25A1Q9BXS0 654 aaPredicted RBP16.14■□□□□ 0.18
ERCC2-203ENST00000391944 BARX1Q9HBU1 254 aaPredicted RBP16.14■□□□□ 0.18
ERCC2-203ENST00000391944 ZFP57Q9NU63 452 aa16.14■□□□□ 0.18
ERCC2-203ENST00000391944 UBE2J1Q9Y385 318 aaPredicted RBP16.14■□□□□ 0.18
ERCC2-203ENST00000391944 K7EPK0 472 aa16.14■□□□□ 0.17
ERCC2-203ENST00000391944 SCGB1D2O95969 90 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms