RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 LRRC25Q8N386 305 aaPredicted RBP4.87□□□□□ -1.63
TRAV35-201ENST00000390462 OR1S1Q8NH92 325 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 ASB17Q8WXJ9 295 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 CLDN23Q96B33 292 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 OR10C1Q96KK4 312 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 SIGLEC12Q96PQ1 595 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 MRIQ9BWK5 157 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 SUCNR1Q9BXA5 334 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 TPK1Q9H3S4 243 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 VSIRQ9H7M9 311 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 ZDHHC11Q9H8X9 412 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 BATF3Q9NR55 127 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 DDX19AQ9NUU7 478 aaKnown RBP4.87□□□□□ -1.63
TRAV35-201ENST00000390462 ZNF226Q9NYT6 803 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 VPS29Q9UBQ0 182 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 PSG11Q9UQ72 335 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 CACNG2Q9Y698 323 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 TANC1Q9C0D5 1861 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 MTCL1Q9Y4B5 1905 aaKnown RBP4.86□□□□□ -1.63
TRAV35-201ENST00000390462 NDUFS5O43920 106 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 CNMDO75829 334 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 MOSP00540 346 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 RAB3AP20336 220 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 CD70P32970 193 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 RCVRNP35243 200 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 DRD3P35462 400 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 NCBP2P52298 156 aaKnown RBP eCLIP4.86□□□□□ -1.63
TRAV35-201ENST00000390462 ZNF138P52744 262 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 LAMTOR4Q0VGL1 99 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 RUNX3Q13761 415 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 ARFRP1Q13795 201 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 POU6F1Q14863 301 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 RGNQ15493 299 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 C1orf195Q5TG92 126 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 TRIQKQ629K1 86 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 RASSF6Q6ZTQ3 369 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 ZNF614Q8N883 585 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 OR4P4Q8NGL7 312 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 OR4S2Q8NH73 311 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 AURKBQ96GD4 344 aaPredicted RBP4.86□□□□□ -1.63
TRAV35-201ENST00000390462 SMARCD1Q96GM5 515 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 DUX3Q96PT4 197 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 EMC6Q9BV81 110 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 OR51I1Q9H343 314 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 SLC25A22Q9H936 323 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 GNB4Q9HAV0 340 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 CCL28Q9NRJ3 127 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 HEBP1Q9NRV9 189 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 INIPQ9NRY2 104 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 SIGLEC7Q9Y286 467 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 LSM5Q9Y4Y9 91 aaKnown RBP4.86□□□□□ -1.63
TRAV35-201ENST00000390462 GVINP1Q7Z2Y8 2422 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 MAP1BP46821 2468 aaKnown RBP4.86□□□□□ -1.63
TRAV35-201ENST00000390462 CHD6Q8TD26 2715 aa4.86□□□□□ -1.63
TRAV35-201ENST00000390462 DOCK7Q96N67 2140 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 NCOR2Q9Y618 2525 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 DMXL1Q9Y485 3027 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 CFAP47Q6ZTR5 3102 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 VPS13AQ96RL7 3174 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 IGHV3-35A0A0C4DH35 117 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 CIB4A0PJX0 185 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 DISC1C4P0D8 188 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 I3L4J1 428 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 BMPR1BO00238 502 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 SOCS3O14543 225 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 KLRC4O43908 158 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 FSHBP01225 129 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 CST2P09228 141 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 ICAM2P13598 275 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 IL9P15248 144 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 CCR7P32248 378 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 LGALS7P47929 136 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 LINC00205P59089 165 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 KDM4DQ6B0I6 523 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 ZNF493Q6ZR52 646 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 H2AFVQ71UI9 128 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 COX18Q8N8Q8 333 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 OR51D1Q8NGF3 324 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 PAK5Q9P286 719 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 TBX21Q9UL17 535 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 TRAPPC4Q9Y296 219 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 NLRC5Q86WI3 1866 aa4.85□□□□□ -1.63
TRAV35-201ENST00000390462 CHD8Q9HCK8 2581 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 ACACBO00763 2458 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 ATRXP46100 2492 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 ARID1BQ8NFD5 2236 aaPredicted RBP4.84□□□□□ -1.63
TRAV35-201ENST00000390462 TET1Q8NFU7 2136 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 IGLV8-61A0A075B6I0 122 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 IGLV7-46A0A075B6I9 117 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 SMIM26A0A096LP01 95 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 A0A1B0GV72 72 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 GOLGA6L4A6NEF3 574 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 CA11O75493 328 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 HMGN1P05114 100 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 ALPLP05186 524 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 CHTF8P0CG12 524 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 TAC1P20366 129 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 M6PRP20645 277 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 PSMB2P49721 201 aa4.84□□□□□ -1.63
TRAV35-201ENST00000390462 TAS2R43P59537 309 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms