RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 GFI1BQ5VTD9 330 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 PRAMEF6Q5VXH4 476 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 RABEPKQ7Z6M1 372 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 Q8WTZ3 238 aa12.46□□□□□ -0.42
RTF1-201ENST00000389629 NEIL1Q96FI4 390 aaPredicted RBP12.46□□□□□ -0.42
RTF1-201ENST00000389629 FREM3P0C091 2139 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 F8VVB4 439 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 F8VWA3 439 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 TMEM50BP56557 158 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 FAM3BP58499 235 aaPredicted RBP12.45□□□□□ -0.42
RTF1-201ENST00000389629 SLC35E3Q7Z769 313 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 KLHDC1Q8N7A1 406 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 PLPPR2Q96GM1 343 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 TECTBQ96PL2 329 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 STARD10Q9Y365 291 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 PLXND1Q9Y4D7 1925 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 ARHGEF17Q96PE2 2063 aaPredicted RBP12.45□□□□□ -0.42
RTF1-201ENST00000389629 MS4A18H0YCH9 400 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 CRYAAP02489 173 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 HSPB1P04792 205 aaKnown RBP12.45□□□□□ -0.42
RTF1-201ENST00000389629 IFI6P09912 130 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 CEACAM16Q2WEN9 425 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 MS4A18Q3C1V0 323 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 MRPL30Q8TCC3 161 aaKnown RBP12.45□□□□□ -0.42
RTF1-201ENST00000389629 P4HTMQ9NXG6 502 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 IGHV1OR21-1A0A087WYE8 117 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 SYNGR2O43760 224 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 HSBP1O75506 76 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 TIGITQ495A1 244 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 MRGPRGQ86SM5 289 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 ZNF596Q8TC21 504 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 SCARF2Q96GP6 870 aaPredicted RBP12.45□□□□□ -0.42
RTF1-201ENST00000389629 TRDCB7Z8K6 153 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 TSPAN2O60636 221 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 PAGE4O60829 102 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 ANKRD37Q7Z713 158 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 CLDN23Q96B33 292 aa12.45□□□□□ -0.42
RTF1-201ENST00000389629 TMEM14DPA8MWL7 114 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 GLB1P16278 677 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 HIST1H1BP16401 226 aaKnown RBP12.44□□□□□ -0.42
RTF1-201ENST00000389629 GLIPR1P48060 266 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 MYOTQ9UBF9 498 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 CRYM-AS1A6NIL9 109 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 ABHD17BQ5VST6 288 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 DTD1Q8TEA8 209 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 DAZAP1Q96EP5 407 aaKnown RBP12.44□□□□□ -0.42
RTF1-201ENST00000389629 M0QZK8 103 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 GGCTO75223 188 aaKnown RBP12.44□□□□□ -0.42
RTF1-201ENST00000389629 NANOS1Q8WY41 292 aaKnown RBP12.44□□□□□ -0.42
RTF1-201ENST00000389629 GPR27Q9NS67 375 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 FNDC1Q4ZHG4 1894 aaPredicted RBP12.44□□□□□ -0.42
RTF1-201ENST00000389629 PITX3O75364 302 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 ZNF32P17041 273 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 TMEM164Q5U3C3 297 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 DUSP23Q9BVJ7 150 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 MTCH2Q9Y6C9 303 aa12.44□□□□□ -0.42
RTF1-201ENST00000389629 MDH2P40926 338 aaKnown RBP12.43□□□□□ -0.42
RTF1-201ENST00000389629 HYAL1Q12794 435 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 PYY3Q5JQD4 70 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 ADIPOR1Q96A54 375 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 VOPP1Q96AW1 172 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 RTBDNQ9BSG5 229 aaPredicted RBP12.43□□□□□ -0.42
RTF1-201ENST00000389629 SOX7Q9BT81 388 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 TRAV39A0A0B4J263 110 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 C11orf94C9JXX5 98 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 OR7C2O60412 319 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 CNN1P51911 297 aaKnown RBP12.43□□□□□ -0.42
RTF1-201ENST00000389629 LBHQ53QV2 105 aaPredicted RBP12.43□□□□□ -0.42
RTF1-201ENST00000389629 SCN5AQ14524 2016 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 IGKV1D-43A0A0B4J1Z2 117 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 FCGR3AP08637 254 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 GPX4P36969 197 aaPredicted RBP12.43□□□□□ -0.42
RTF1-201ENST00000389629 NUFIP2Q7Z417 695 aaKnown RBP12.43□□□□□ -0.42
RTF1-201ENST00000389629 ZDHHC23Q8IYP9 409 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 PISDQ9UG56 409 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 AHCTF1Q8WYP5 2266 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 SIAH2O43255 324 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 RAB35Q15286 201 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 ABHD14AQ9BUJ0 271 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 CYTL1Q9NRR1 136 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 LHFPL6Q9Y693 200 aa12.43□□□□□ -0.42
RTF1-201ENST00000389629 ACTL6BO94805 426 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 GCGP01275 180 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 DUSP3P51452 185 aaPredicted RBP12.42□□□□□ -0.42
RTF1-201ENST00000389629 SDK2Q58EX2 2172 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 PRR27Q6MZM9 219 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 NAGKQ9UJ70 344 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 MDC1Q14676 2089 aaKnown RBP12.42□□□□□ -0.42
RTF1-201ENST00000389629 A6NCN8 305 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 HIST1H2BKO60814 126 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 HIST1H2BJP06899 126 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 POU2F2P09086 479 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 IGFBP3P17936 291 aaPredicted RBP12.42□□□□□ -0.42
RTF1-201ENST00000389629 HIST1H2BOP23527 126 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 HIST1H2BBP33778 126 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 HIST1H2BDP58876 126 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 HIST1H2BCP62807 126 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 HIST2H2BEQ16778 126 aa12.42□□□□□ -0.42
RTF1-201ENST00000389629 RSPO4Q2I0M5 234 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms