RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 OR2A4O95047 310 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 ERVFRD-1P60508 538 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 PTRH1Q86Y79 214 aaKnown RBP9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 OR2A7Q96R45 310 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 FAM53CQ9NYF3 392 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 CLN8Q9UBY8 286 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 FN1P02751 2386 aaKnown RBP9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 LIAT1Q6ZQX7 453 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 TMEM56-RWDD3S4R434 201 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 A0A087WUJ7 227 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 GPX2P18283 190 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 GPNMBQ14956 572 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 GEMIN7Q9H840 131 aaKnown RBP9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 H7C2G1 150 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 WNT3P56703 355 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 DGCR2P98153 550 aa9.98□□□□□ -0.81
PTCHD1-201ENST00000379361 DNAJC25-GNG10A0A024R161 153 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 C16orf97H3BN30 126 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 CD99P14209 185 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 GABRB1P18505 474 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 B3GNT9Q6UX72 402 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 MRGPREQ86SM8 312 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 ELOA3CA0A087WX78 387 aaPredicted RBP9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 MRPS11P82912 194 aaKnown RBP9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 FAM74A3Q4VXF1 159 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 TMEM78Q5T7P6 136 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 RNF165Q6ZSG1 346 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 LTB4R2Q9NPC1 389 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 SF3B6Q9Y3B4 125 aaKnown RBP9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 NPPBP16860 134 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 LGALS3P17931 250 aaKnown RBP9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 FAM109BQ6ICB4 259 aaPredicted RBP9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 OR10G4Q8NGN3 311 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 OR10G9Q8NGN4 311 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 OR10G7Q8NGN6 311 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 NT5CQ8TCD5 201 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 RECKO95980 971 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 PSG5Q15238 335 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 HIST3H3Q16695 136 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 RHNO1Q9BSD3 238 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 CHODLQ9H9P2 273 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 PARP11Q9NR21 331 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 TAF1LQ8IZX4 1826 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 AESQ08117 197 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 TMEM99Q8N816 258 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 MAP6Q96JE9 813 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 FGF22Q9HCT0 170 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 IGKV3-7A0A075B6H7 116 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 C7orf72A4D263 438 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 WDR25Q64LD2 544 aaPredicted RBP9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 ANKRD34AQ69YU3 496 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 ALKAL1Q6UXT8 129 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 C16orf92Q96LL3 132 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 CCL19Q99731 98 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 IGLV3-10A0A075B6K4 115 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 RER1O15258 196 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 RNF224P0DH78 156 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 SLC6A12P48065 614 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 GFERP55789 205 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 GGTLC2Q14390 218 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 C11orf87Q6NUJ2 197 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 SIGLEC1Q9BZZ2 1709 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 MBPP02686 304 aaPredicted RBP9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 MMP15P51511 669 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 SOX8P57073 446 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 PNRC1Q12796 327 aaPredicted RBP9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 BEND2Q8NDZ0 799 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 B9D1Q9UPM9 204 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 WSB1Q9Y6I7 421 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 C3orf85A0A1B0GTC6 90 aa9.97□□□□□ -0.81
PTCHD1-201ENST00000379361 A0A1W2PR80 420 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 MBTPS2O43462 519 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 APCSP02743 223 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 COL25A1Q9BXS0 654 aaPredicted RBP9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 C2CD3Q4AC94 2353 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 FGF8P55075 233 aaPredicted RBP9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 WNT16Q9UBV4 365 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 C10orf113Q5VZT2 155 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 GALNT14Q96FL9 552 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 PCDH15Q96QU1 1955 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 METTL12A8MUP2 240 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 OR5AC1P0C628 307 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 WNT5AP41221 380 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 ABLIM2Q6H8Q1 611 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 MAMSTRQ6ZN01 415 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 PLPPR2Q96GM1 343 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 HLA-DRB5Q30154 266 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 C20orf196Q8IYI0 205 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 MMDQ15546 238 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 ZIC5Q96T25 663 aa9.96□□□□□ -0.81
PTCHD1-201ENST00000379361 TNRC6AQ8NDV7 1962 aaKnown RBP9.96□□□□□ -0.82
PTCHD1-201ENST00000379361 LRRC75BQ2VPJ9 315 aa9.96□□□□□ -0.82
PTCHD1-201ENST00000379361 FAM106AQ4KMX7 169 aa9.96□□□□□ -0.82
PTCHD1-201ENST00000379361 PRNTQ86SH4 94 aa9.96□□□□□ -0.82
PTCHD1-201ENST00000379361 CDX2Q99626 313 aaPredicted RBP9.96□□□□□ -0.82
PTCHD1-201ENST00000379361 SLC25A10Q9UBX3 287 aaPredicted RBP9.96□□□□□ -0.82
PTCHD1-201ENST00000379361 C21orf140B9A014 251 aa9.96□□□□□ -0.82
PTCHD1-201ENST00000379361 CLDN20P56880 219 aa9.96□□□□□ -0.82
PTCHD1-201ENST00000379361 KLRB1Q12918 225 aa9.96□□□□□ -0.82
PTCHD1-201ENST00000379361 CLRN3Q8NCR9 226 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms