RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 TMEM50BP56557 158 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 SCAND1P57086 179 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 VBP1P61758 197 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 SCGB2A2Q13296 93 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 FAM189A2Q15884 450 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 GPR157Q5UAW9 335 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 NCR3LG1Q68D85 454 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 HCP5Q6MZN7 132 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 C9orf139Q6ZV77 190 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 ETAA1Q9NY74 926 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 HSF4Q9ULV5 492 aa15.34■□□□□ 0.05
SSU72-203ENST00000378725 IGHV3OR16-10A0A075B7F0 116 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 IGHV1-69DA0A0B4J2H0 117 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 TMEM30CPA0ZSE6 113 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 RNASEK-C17orf49H0YIS7 233 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 IGHV1-69P01742 117 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 VEGFCP49767 419 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 DLX1P56177 255 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 C17orf58Q2M2W7 97 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 IDNKQ5T6J7 187 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 C6orf201Q7Z4U5 140 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 TRAPPC6BQ86SZ2 158 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 OR56B1Q8NGI3 324 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 OR13A1Q8NGR1 328 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 NEK7Q8TDX7 302 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 CYYR1Q96J86 154 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 SULT4A1Q9BR01 284 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 FAAP24Q9BTP7 215 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 GAL3ST2Q9H3Q3 398 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 HEXA-AS1Q9H8Q6 139 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 LINC00574Q9H8X3 128 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 ZNF69Q9UC07 566 aa15.33■□□□□ 0.04
SSU72-203ENST00000378725 UBE2QL1A1L167 161 aa15.32■□□□□ 0.04
SSU72-203ENST00000378725 ZNF729A6NN14 1252 aaPredicted RBP15.32■□□□□ 0.04
SSU72-203ENST00000378725 IGHV1-8P0DP01 117 aa15.32■□□□□ 0.04
SSU72-203ENST00000378725 SNRPBP14678 240 aaKnown RBP15.32■□□□□ 0.04
SSU72-203ENST00000378725 GZMHP20718 246 aa15.32■□□□□ 0.04
SSU72-203ENST00000378725 FPR2P25090 351 aa15.32■□□□□ 0.04
SSU72-203ENST00000378725 SERPINB10P48595 397 aa15.32■□□□□ 0.04
SSU72-203ENST00000378725 UBE2E1P51965 193 aa15.32■□□□□ 0.04
SSU72-203ENST00000378725 GUCA2AQ02747 115 aa15.32■□□□□ 0.04
SSU72-203ENST00000378725 NKAPLQ5M9Q1 402 aa15.32■□□□□ 0.04
SSU72-203ENST00000378725 DYRK2Q92630 601 aa15.32■□□□□ 0.04
SSU72-203ENST00000378725 SLC25A46Q96AG3 418 aa15.32■□□□□ 0.04
SSU72-203ENST00000378725 PLEKHJ1Q9NW61 149 aa15.32■□□□□ 0.04
SSU72-203ENST00000378725 WNK2Q9Y3S1 2297 aa15.32■□□□□ 0.04
SSU72-203ENST00000378725 KBTBD11-OT1A0A1B0GTJ5 212 aa15.31■□□□□ 0.04
SSU72-203ENST00000378725 METTL21EPA6NDL7 271 aa15.31■□□□□ 0.04
SSU72-203ENST00000378725 RAB27BO00194 218 aa15.31■□□□□ 0.04
SSU72-203ENST00000378725 MMP23AO75900 390 aa15.31■□□□□ 0.04
SSU72-203ENST00000378725 PAHP00439 452 aa15.31■□□□□ 0.04
SSU72-203ENST00000378725 PRB3Q04118 309 aaPredicted RBP15.31■□□□□ 0.04
SSU72-203ENST00000378725 HEPN1Q6WQI6 88 aa15.31■□□□□ 0.04
SSU72-203ENST00000378725 Q6ZTK2 550 aa15.31■□□□□ 0.04
SSU72-203ENST00000378725 BCL6BQ8N143 479 aaPredicted RBP15.31■□□□□ 0.04
SSU72-203ENST00000378725 MS4A7Q9GZW8 240 aaPredicted RBP15.31■□□□□ 0.04
SSU72-203ENST00000378725 ABRACLQ9P1F3 81 aa15.31■□□□□ 0.04
SSU72-203ENST00000378725 ETV7Q9Y603 341 aa15.31■□□□□ 0.04
SSU72-203ENST00000378725 SESN1Q9Y6P5 492 aa15.31■□□□□ 0.04
SSU72-203ENST00000378725 NPIPB11E5RHQ5 1161 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 CLPXO76031 633 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 TMBIM6P55061 237 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 RIPPLY3P57055 190 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 KLRD1Q13241 179 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 MOGAT2Q3SYC2 334 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 PLAC9Q5JTB6 97 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 BRD3OSQ6XYD6 125 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 RTN4RL2Q86UN3 420 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 CLVS1Q8IUQ0 354 aaPredicted RBP15.3■□□□□ 0.04
SSU72-203ENST00000378725 PDZD9Q8IXQ8 264 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 PIP4P2Q8N4L2 257 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 OR10R2Q8NGX6 335 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 LGALS14Q8TCE9 139 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 MRGPRDQ8TDS7 321 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 ARHGAP5-AS1Q96IT6 56 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 BCL7BQ9BQE9 202 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 PECRQ9BY49 303 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 CALYQ9NYX4 217 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 SPATA2Q9UM82 520 aa15.3■□□□□ 0.04
SSU72-203ENST00000378725 TRAV39A0A0B4J263 110 aa15.29■□□□□ 0.04
SSU72-203ENST00000378725 ORC5O43913 435 aa15.29■□□□□ 0.04
SSU72-203ENST00000378725 CDK2P24941 298 aa15.29■□□□□ 0.04
SSU72-203ENST00000378725 GLP1RP43220 463 aa15.29■□□□□ 0.04
SSU72-203ENST00000378725 RUSC1-AS1Q66K80 236 aa15.29■□□□□ 0.04
SSU72-203ENST00000378725 ZNF782Q6ZMW2 699 aaPredicted RBP15.29■□□□□ 0.04
SSU72-203ENST00000378725 USP43Q70EL4 1123 aa15.29■□□□□ 0.04
SSU72-203ENST00000378725 OR5H6Q8NGV6 325 aa15.29■□□□□ 0.04
SSU72-203ENST00000378725 MRPL30Q8TCC3 161 aaKnown RBP15.29■□□□□ 0.04
SSU72-203ENST00000378725 CCDC107Q8WV48 283 aa15.29■□□□□ 0.04
SSU72-203ENST00000378725 C22orf15Q8WYQ4 148 aa15.29■□□□□ 0.04
SSU72-203ENST00000378725 ATG5Q9H1Y0 275 aa15.29■□□□□ 0.04
SSU72-203ENST00000378725 PRDM13Q9H4Q3 707 aa15.29■□□□□ 0.04
SSU72-203ENST00000378725 MBNL3Q9NUK0 354 aaKnown RBP15.29■□□□□ 0.04
SSU72-203ENST00000378725 KCNK7Q9Y2U2 307 aa15.29■□□□□ 0.04
SSU72-203ENST00000378725 SOX21Q9Y651 276 aaPredicted RBP15.29■□□□□ 0.04
SSU72-203ENST00000378725 C15orf65H3BRN8 121 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 NPFFO15130 113 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 IFNA2P01563 188 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 GDNFP39905 211 aa15.28■□□□□ 0.04
SSU72-203ENST00000378725 PRAMEF5Q5TYX0 476 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms