RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 GLRX2Q9NS18 164 aa11.46□□□□□ -0.58
NPHP4-203ENST00000378169 NKX2-6A6NCS4 301 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 NUDT19A8MXV4 375 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 HAND1O96004 215 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 UMODP07911 640 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 SFTA3P0C7M3 94 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 SLC25A4P12235 298 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 RAB5CP51148 216 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 H2BFSP57053 126 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 MPV17LQ2QL34 196 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 C1QL2Q7Z5L3 287 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 MRGPRFQ96AM1 343 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 TAAR6Q96RI8 345 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 USF3Q68DE3 2245 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 CDRT15L2A8MXV6 281 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 TMPRSS2O15393 492 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 SYNGR1O43759 233 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 ZIC3O60481 467 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 SLC25A6P12236 298 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 SUCLG1P53597 346 aaKnown RBP11.45□□□□□ -0.58
NPHP4-203ENST00000378169 GAS1P54826 345 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 TMEM211Q6ICI0 200 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 TVP23CQ96ET8 276 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 IMMP1LQ96LU5 166 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 SAMD10Q9BYL1 202 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 ACTR3CQ9C0K3 210 aaPredicted RBP11.45□□□□□ -0.58
NPHP4-203ENST00000378169 KCNIP2Q9NS61 270 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 PMELP40967 661 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 SSX2Q16385 188 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 RIPPLY2Q5TAB7 128 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 ZNF826PQ6ZT77 177 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 DHRS9Q9BPW9 319 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.45□□□□□ -0.58
NPHP4-203ENST00000378169 HEATR5AQ86XA9 2040 aa11.45□□□□□ -0.58
NPHP4-203ENST00000378169 MUC6Q6W4X9 2439 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 NDUFB3O43676 98 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 EFNB1P98172 346 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 LOXL4Q96JB6 756 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 PATZ1Q9HBE1 687 aaKnown RBP11.44□□□□□ -0.58
NPHP4-203ENST00000378169 IGLV3-12A0A075B6K2 115 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 A0A1W2PPH5 198 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 C4orf17Q53FE4 359 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 STUMQ69YW2 141 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 ACY3Q96HD9 319 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 NMES1Q9C002 83 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 PCNX2A6NKB5 2137 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 ARPC4-TTLL3A0A0A6YYG9 625 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 A0A0B4J293 547 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 BTBD17A6NE02 478 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 SCTP09683 121 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 NPBWR2P48146 333 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 TIPARPQ7Z3E1 657 aaKnown RBP11.44□□□□□ -0.58
NPHP4-203ENST00000378169 VOPP1Q96AW1 172 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 RAB40CQ96S21 281 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 WNT5BQ9H1J7 359 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 OSGIN2Q9Y236 505 aa11.44□□□□□ -0.58
NPHP4-203ENST00000378169 OR5H1A6NKK0 313 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 ZP3P21754 424 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 IL13RA2Q14627 380 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 FNDC7Q5VTL7 733 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 TMEM105Q8N8V8 129 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 UQCC1Q9NVA1 299 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 SPG11Q96JI7 2443 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 MDH2P40926 338 aaKnown RBP11.43□□□□□ -0.58
NPHP4-203ENST00000378169 ERHP84090 104 aaKnown RBP11.43□□□□□ -0.58
NPHP4-203ENST00000378169 SLC38A11Q08AI6 406 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 TMEM41BQ5BJD5 291 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 VAX1Q5SQQ9 334 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 HIST2H3AQ71DI3 136 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 MS4A7Q9GZW8 240 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-203ENST00000378169 OPN3Q9H1Y3 402 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-203ENST00000378169 GPR132Q9UNW8 380 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 ANAPC1Q9H1A4 1944 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 NPIPB13A6NJU9 1138 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 NPIPB4C9JG80 1138 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 NPIPB7O75200 414 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 PRF1P14222 555 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 RCC1P18754 421 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-203ENST00000378169 LRRC10Q5BKY1 277 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 C9orf152Q5JTZ5 239 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 INO80CQ6PI98 192 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-203ENST00000378169 AQP3Q92482 292 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 PHYHIPLQ96FC7 376 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 WSB1Q9Y6I7 421 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 IGHV3OR15-7A0A075B7D8 119 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 DHRS7CA6NNS2 312 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 RPL36A-HNRNPH2H7BZ11 118 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 TMEM11P17152 192 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 SUB1P53999 127 aaKnown RBP eCLIP11.43□□□□□ -0.58
NPHP4-203ENST00000378169 ACOT6Q3I5F7 207 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-203ENST00000378169 CEACAM21Q3KPI0 293 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 CA5BP1Q8WTZ4 195 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 NPDC1Q9NQX5 325 aaPredicted RBP11.43□□□□□ -0.58
NPHP4-203ENST00000378169 AMDHD2Q9Y303 409 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 MMP24Q9Y5R2 645 aa11.43□□□□□ -0.58
NPHP4-203ENST00000378169 SYNGR2O43760 224 aa11.42□□□□□ -0.58
NPHP4-203ENST00000378169 IGHMP01871 453 aa11.42□□□□□ -0.58
NPHP4-203ENST00000378169 ZNF154Q13106 437 aa11.42□□□□□ -0.58
NPHP4-203ENST00000378169 UNC119Q13432 240 aa11.42□□□□□ -0.58
NPHP4-203ENST00000378169 ENDOGQ14249 297 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms