RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 CITED1Q99966 193 aa9.34□□□□□ -0.91
SMARCE1-203ENST00000377808 CDCA4Q9BXL8 241 aa9.34□□□□□ -0.91
SMARCE1-203ENST00000377808 ZNF696Q9H7X3 374 aa9.34□□□□□ -0.91
SMARCE1-203ENST00000377808 PITPNC1Q9UKF7 332 aa9.34□□□□□ -0.91
SMARCE1-203ENST00000377808 KIAA2026Q5HYC2 2103 aa9.34□□□□□ -0.91
SMARCE1-203ENST00000377808 VGLL3A8MV65 326 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 LEUTXA8MZ59 168 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 H3BUI4 141 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 TIMM23O14925 209 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 PIN1P1O15428 100 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 RGS10O43665 173 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 GPX5O75715 221 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 IL1AP01583 271 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 CD1AP06126 327 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 SSTR5P35346 364 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 HSPA13P48723 471 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 GNG10P50151 68 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 PRRX1P54821 245 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 BDH1Q02338 343 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 MPV17LQ2QL34 196 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 ACSM3Q53FZ2 586 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 TREML4Q6UXN2 200 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 NKAIN3Q8N8D7 197 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 PIFOQ8TCI5 191 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 CCDC107Q8WV48 283 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 CAPSLQ8WWF8 208 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 LEAP2Q969E1 77 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 FAM46BQ96A09 425 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 ANKRD60Q9BZ19 345 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 BANF2Q9H503 90 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 IDI2-AS1Q9NZ38 188 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 DPM3Q9P2X0 92 aa9.33□□□□□ -0.92
SMARCE1-203ENST00000377808 TMEM30CPA0ZSE6 113 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 A6NDX4 124 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 M0QZ24 198 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 PEX14O75381 377 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 VSIG10L2P0DP72 767 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 CD24P25063 80 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 CEACAM3P40198 252 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 GPR50Q13585 617 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 HLA-DRB5Q30154 266 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 NHLRC3Q5JS37 347 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 FAM27D1Q5T7N8 215 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 LIPKQ5VXJ0 399 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 RNLSQ5VYX0 342 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 CCBE1Q6UXH8 406 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 Q6ZTK2 550 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 CEACAM19Q7Z692 300 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 MS4A15Q8N5U1 240 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 KLHDC1Q8N7A1 406 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 C11orf44Q8N8P7 122 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 Q8NFD4 153 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 UBALD1Q8TB05 177 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 TMEM203Q969S6 136 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 KIRREL1Q96J84 757 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 SELENOIQ9C0D9 397 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 RANBP3Q9H6Z4 567 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 FBLN5Q9UBX5 448 aa9.32□□□□□ -0.92
SMARCE1-203ENST00000377808 MCRIP1C9JLW8 97 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 AIPO00170 330 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 MGMTP16455 207 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 BRS3P32247 399 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 VHLP40337 213 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 KIR2DS4P43632 304 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 SLC35A2P78381 396 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 HABP2Q14520 560 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 HSD17B12Q53GQ0 312 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 UTF1Q5T230 341 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 TPTE2P1Q5T6R2 138 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 GLT8D1Q68CQ7 371 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 HIST2H2BDQ6DRA6 164 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 OR9G1Q8NH87 305 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 TOMM40LQ969M1 308 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 RPEQ96AT9 228 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 CREB3L1Q96BA8 519 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 IFT22Q9H7X7 185 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 SPACA1Q9HBV2 294 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 ETAA1Q9NY74 926 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 TRAPPC2LQ9UL33 140 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 LSM2Q9Y333 95 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 AMMECR1Q9Y4X0 333 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 A0A1W2PPE3 182 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 MEGF11A6BM72 1044 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 BUB1B-PAK6H3BSN5 160 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 ATP6V1G2O95670 118 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 MPIG6BO95866 241 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 IGLV1-47P01700 117 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 CD34P28906 385 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 MNDAP41218 407 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 MAP2K4P45985 399 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 DYNLT3P51808 116 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 RPS25P62851 125 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 IRF3Q14653 427 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 HERPUD1Q15011 391 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 NKAPLQ5M9Q1 402 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 RAB12Q6IQ22 244 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 CCDC144NLQ6NUI1 221 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 CDH26Q8IXH8 852 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 PRR18Q8N4B5 295 aa9.31□□□□□ -0.92
SMARCE1-203ENST00000377808 DTX3Q8N9I9 347 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms