RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 TRAV39A0A0B4J263 110 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 M0R2Z0 102 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 CRHP06850 196 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 APELAP0DMC3 54 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 OR4X1Q8NH49 305 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 ASB5Q8WWX0 329 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 SLC2A9Q9NRM0 540 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 PIPOXQ9P0Z9 390 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 OR2W1Q9Y3N9 320 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 SMRP1Q8NCR6 262 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 OR2T10Q8NGZ9 312 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 RNF133Q8WVZ7 376 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 MRGPRFQ96AM1 343 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 NPAS1Q99742 590 aa16.65■□□□□ 0.26
TBC1D4-201ENST00000377625 CCL21O00585 134 aa16.64■□□□□ 0.26
TBC1D4-201ENST00000377625 C10orf113Q5VZT2 155 aa16.64■□□□□ 0.26
TBC1D4-201ENST00000377625 FAM219AQ8IW50 185 aa16.64■□□□□ 0.26
TBC1D4-201ENST00000377625 MRPL24Q96A35 216 aaKnown RBP16.64■□□□□ 0.26
TBC1D4-201ENST00000377625 PERPQ96FX8 193 aa16.64■□□□□ 0.26
TBC1D4-201ENST00000377625 PCDHGA9Q9Y5G4 932 aaKnown RBP16.64■□□□□ 0.26
TBC1D4-201ENST00000377625 IGSF23A1L1A6 192 aa16.64■□□□□ 0.25
TBC1D4-201ENST00000377625 CDRT15L2A8MXV6 281 aa16.64■□□□□ 0.25
TBC1D4-201ENST00000377625 RNF122Q9H9V4 155 aa16.64■□□□□ 0.25
TBC1D4-201ENST00000377625 COL8A1P27658 744 aa16.64■□□□□ 0.25
TBC1D4-201ENST00000377625 MDP1Q86V88 176 aa16.64■□□□□ 0.25
TBC1D4-201ENST00000377625 LPAR2Q9HBW0 351 aa16.64■□□□□ 0.25
TBC1D4-201ENST00000377625 C1QAP02745 245 aa16.64■□□□□ 0.25
TBC1D4-201ENST00000377625 MFNGO00587 321 aa16.64■□□□□ 0.25
TBC1D4-201ENST00000377625 CRXO43186 299 aaPredicted RBP16.64■□□□□ 0.25
TBC1D4-201ENST00000377625 MGAT2Q10469 447 aa16.64■□□□□ 0.25
TBC1D4-201ENST00000377625 ANGPTL6Q8NI99 470 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 LPAR5Q9H1C0 372 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 AESQ08117 197 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 ANAPC16Q96DE5 110 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 CDK5RAP2Q96SN8 1893 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 ISXQ2M1V0 245 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 COL13A1Q5TAT6 717 aaPredicted RBP16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 SLC25A42Q86VD7 318 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 RABAC1Q9UI14 185 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 CRISP2P16562 243 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 ECSCRQ19T08 205 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 RSRP1Q9BUV0 290 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 TTTY12Q9BZ98 90 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 CHST5Q9GZS9 411 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 SYNGR1O43759 233 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 TTRP02766 147 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 FAM157CP0CG43 387 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 ACAA2P42765 397 aaKnown RBP16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 PRSS50Q9UI38 385 aa16.63■□□□□ 0.25
TBC1D4-201ENST00000377625 PRSS23O95084 383 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 DYNLRB2Q8TF09 96 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 DYRK2Q92630 601 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 TRAV8-7A0A075B6U6 113 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 RPL36A-HNRNPH2H7BZ11 118 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 RIGQ13278 110 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 LINC00596Q86U02 117 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 AP5S1Q9NUS5 200 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 ZNF253O75346 499 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 CA11O75493 328 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 SULT1A1P50225 295 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 MMDQ15546 238 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 TMEM171Q8WVE6 324 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 LINC00052Q96N35 136 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 ZNF721Q8TF20 911 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 PRO1933Q9H354 126 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 NKX2-6A6NCS4 301 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 DNPH1O43598 174 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 VSIG8P0DPA2 414 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 HIST3H3Q16695 136 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 ZBTB34Q8NCN2 500 aa16.62■□□□□ 0.25
TBC1D4-201ENST00000377625 LYRM7Q5U5X0 104 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 DOCK1Q14185 1865 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 RNF224P0DH78 156 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 LYZL2Q7Z4W2 148 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 WFDC3Q8IUB2 231 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 FAM222BQ8WU58 562 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 SLC25A10Q9UBX3 287 aaPredicted RBP16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 VAX2Q9UIW0 290 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 V9GYH0 126 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 FOXS1O43638 330 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 MGPP08493 103 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 RPL29P47914 159 aaKnown RBP16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 EWSR1Q01844 656 aaKnown RBP eCLIP16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 CEBPEQ15744 281 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 KCNMB1Q16558 191 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 AWAT1Q58HT5 328 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 OR1L8Q8NGR8 309 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 PCGF1Q9BSM1 259 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 OR2J1Q9GZK6 312 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 DTX4Q9Y2E6 619 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 MELTFP08582 738 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 PEBP1P30086 187 aaKnown RBP16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 PSMB2P49721 201 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 HOXA4Q00056 320 aaPredicted RBP16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 LRP11Q86VZ4 500 aa16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 ZNF385AQ96PM9 386 aaKnown RBP16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 ZNF107Q9UII5 783 aaPredicted RBP16.61■□□□□ 0.25
TBC1D4-201ENST00000377625 CCL27Q9Y4X3 112 aa16.6■□□□□ 0.25
TBC1D4-201ENST00000377625 MYO5AQ9Y4I1 1855 aaKnown RBP16.6■□□□□ 0.25
TBC1D4-201ENST00000377625 AREGP15514 252 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms