RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 LEPROTL1O95214 131 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 A0A1B0GU03 582 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 DHHO43323 396 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 CD74P04233 296 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 CTSDP07339 412 aaPredicted RBP10.33□□□□□ -0.76
VPS13A-205ENST00000376636 ZGLP1P0C6A0 271 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 GPR3P46089 330 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 DEGS2Q6QHC5 323 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 H1FOOQ8IZA3 346 aaPredicted RBP10.33□□□□□ -0.76
VPS13A-205ENST00000376636 RNF133Q8WVZ7 376 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 LSM10Q969L4 123 aaKnown RBP10.33□□□□□ -0.76
VPS13A-205ENST00000376636 WDR34Q96EX3 536 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 WNT16Q9UBV4 365 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 PHLDA3Q9Y5J5 127 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 MYOFQ9NZM1 2061 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 OR4C45A6NMZ5 311 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 CA6P23280 308 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 TRILQ7L0X0 811 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 ZNF735P0CB33 412 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 ARL6IP6Q8N6S5 226 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 OR4X1Q8NH49 305 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 PCOLCE2Q9UKZ9 415 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 CTXND1A0A1B0GTU2 59 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 S1PR2O95136 353 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 WNT1P04628 370 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 FOLR2P14207 255 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 SPNP16150 400 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 RTP5Q14D33 572 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 OR4D9Q8NGE8 314 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 MAP1LC3AQ9H492 121 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 GEMIN7Q9H840 131 aaKnown RBP10.33□□□□□ -0.76
VPS13A-205ENST00000376636 PITX3O75364 302 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 LIPFP07098 398 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 MFAP2P55001 183 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 OR10J6PQ8NGY7 276 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 SGMS2Q8NHU3 365 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 TM4SF19Q96DZ7 209 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 TXNDC17Q9BRA2 123 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 DNAJB12Q9NXW2 375 aaKnown RBP10.33□□□□□ -0.76
VPS13A-205ENST00000376636 CADP27708 2225 aa10.33□□□□□ -0.76
VPS13A-205ENST00000376636 ARF6P62330 175 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 SMUG1Q53HV7 270 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 TMEM78Q5T7P6 136 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 C16orf82Q7Z2V1 217 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 PRNTQ86SH4 94 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 OR8B2Q96RD0 313 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 LAMB2P55268 1798 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 FGF17O60258 216 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 WDR25Q64LD2 544 aaPredicted RBP10.32□□□□□ -0.76
VPS13A-205ENST00000376636 NFAM1Q8NET5 270 aaPredicted RBP10.32□□□□□ -0.76
VPS13A-205ENST00000376636 RAB1CQ92928 201 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 TMPRSS2O15393 492 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 CDAP32320 146 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 KBTBD11O94819 623 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 TYMSP04818 313 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 FAM109BQ6ICB4 259 aaPredicted RBP10.32□□□□□ -0.76
VPS13A-205ENST00000376636 FAM222BQ8WU58 562 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 C7orf77A4D0Y5 90 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 FAM181BA6NEQ2 426 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 ALG1L2C9J202 215 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 EMDP50402 254 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 LRRC75BQ2VPJ9 315 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 EBLN2Q6P2I7 272 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 CCL17Q92583 94 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 LTB4R2Q9NPC1 389 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 ZBTB42B2RXF5 422 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 CXCL13O43927 109 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 LINC00469Q8N7U9 141 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 RND1Q92730 232 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 GALNT14Q96FL9 552 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 RAB33BQ9H082 229 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 FAM27D1Q5T7N8 215 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 CLEC18BQ6UXF7 455 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 STPG3Q8N7X2 389 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 RNF186Q9NXI6 227 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 HIGD1AQ9Y241 93 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 HLA-DRB1P01911 266 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 IL20Q9NYY1 176 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 C1QTNF9BB2RNN3 333 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 SLC35B1P78383 322 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 CBLN2Q8IUK8 224 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 CXXC4Q9H2H0 198 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 SIRT5Q9NXA8 310 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 RABAC1Q9UI14 185 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 RREB1Q92766 1687 aa10.32□□□□□ -0.76
VPS13A-205ENST00000376636 GHITMQ9H3K2 345 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 SOCS7O14512 581 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 PPM1DO15297 605 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 SLIRPQ9GZT3 109 aaKnown RBP10.31□□□□□ -0.76
VPS13A-205ENST00000376636 NEU3Q9UQ49 428 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 TGIF2-C20orf24A0A0A6YYL0 155 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 DLX6P56179 175 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 WNT9BO14905 357 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 DDTP30046 118 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 LHFPL5Q8TAF8 219 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 SSMEM1Q8WWF3 244 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 MEF2CQ06413 473 aaPredicted RBP10.31□□□□□ -0.76
VPS13A-205ENST00000376636 PYCR3Q53H96 274 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 ZNF506Q5JVG8 444 aa10.31□□□□□ -0.76
VPS13A-205ENST00000376636 OR13H1Q8NG92 308 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms