RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 OR5H8P0DN80 308 aa12□□□□□ -0.49
MSH5-202ENST00000375740 DTYMKP23919 212 aa12□□□□□ -0.49
MSH5-202ENST00000375740 PRDX4Q13162 271 aa12□□□□□ -0.49
MSH5-202ENST00000375740 HEPN1Q6WQI6 88 aa12□□□□□ -0.49
MSH5-202ENST00000375740 MRPL21Q7Z2W9 205 aaKnown RBP12□□□□□ -0.49
MSH5-202ENST00000375740 LYPD6BQ8NI32 183 aa12□□□□□ -0.49
MSH5-202ENST00000375740 APOBEC3DQ96AK3 386 aaPredicted RBP12□□□□□ -0.49
MSH5-202ENST00000375740 MISP3Q96FF7 219 aa12□□□□□ -0.49
MSH5-202ENST00000375740 BSCL2Q96G97 398 aaPredicted RBP12□□□□□ -0.49
MSH5-202ENST00000375740 ZNF552Q9H707 407 aaPredicted RBP12□□□□□ -0.49
MSH5-202ENST00000375740 PARD6AQ9NPB6 346 aa12□□□□□ -0.49
MSH5-202ENST00000375740 FBXO7Q9Y3I1 522 aa12□□□□□ -0.49
MSH5-202ENST00000375740 ARHGAP21Q5T5U3 1957 aa12□□□□□ -0.49
MSH5-202ENST00000375740 SPAARA0A1B0GVQ0 90 aa12□□□□□ -0.49
MSH5-202ENST00000375740 IFNA17P01571 189 aa12□□□□□ -0.49
MSH5-202ENST00000375740 HIST1H1BP16401 226 aaKnown RBP12□□□□□ -0.49
MSH5-202ENST00000375740 S100A2P29034 98 aa12□□□□□ -0.49
MSH5-202ENST00000375740 ZNF616Q08AN1 781 aa12□□□□□ -0.49
MSH5-202ENST00000375740 MALLQ13021 153 aa12□□□□□ -0.49
MSH5-202ENST00000375740 SRSF6Q13247 344 aaKnown RBP12□□□□□ -0.49
MSH5-202ENST00000375740 ZNF343Q6P1L6 599 aa12□□□□□ -0.49
MSH5-202ENST00000375740 VASH2Q86V25 355 aa12□□□□□ -0.49
MSH5-202ENST00000375740 UBAC2Q8NBM4 344 aa12□□□□□ -0.49
MSH5-202ENST00000375740 CA5BP1Q8WTZ4 195 aa12□□□□□ -0.49
MSH5-202ENST00000375740 POM121L2Q96KW2 1035 aa12□□□□□ -0.49
MSH5-202ENST00000375740 YPEL4Q96NS1 127 aa12□□□□□ -0.49
MSH5-202ENST00000375740 GPR61Q9BZJ8 451 aa12□□□□□ -0.49
MSH5-202ENST00000375740 FGF23Q9GZV9 251 aaPredicted RBP12□□□□□ -0.49
MSH5-202ENST00000375740 NKX2-8O15522 239 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 ZNF205O95201 554 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 PTGER4P35408 488 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 CASP6P55212 293 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 RBM11P57052 281 aaKnown RBP11.99□□□□□ -0.49
MSH5-202ENST00000375740 TAS2R60P59551 318 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 FBXL17Q9UF56 701 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 CELSR3Q9NYQ7 3312 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 PDCD6O75340 191 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 SOD3P08294 240 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 PLP2Q04941 152 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 HIKESHIQ53FT3 197 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 REC114Q7Z4M0 266 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 NECAP2Q9NVZ3 263 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 GFOD1Q9NXC2 390 aa11.99□□□□□ -0.49
MSH5-202ENST00000375740 PUS1Q9Y606 427 aaKnown RBP eCLIP11.99□□□□□ -0.49
MSH5-202ENST00000375740 OR2C1O95371 312 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 FTH1P19P0C7X4 201 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 ECI1P42126 302 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 SOX8P57073 446 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 PMP22Q01453 160 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 IL15RAQ13261 267 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 DAZAP2Q15038 168 aaPredicted RBP11.98□□□□□ -0.49
MSH5-202ENST00000375740 STX12Q86Y82 276 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 TMEM178AQ8NBL3 297 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 POC1AQ8NBT0 407 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 DECR2Q9NUI1 292 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 SLC22A20A6NK97 555 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 CDRT15L2A8MXV6 281 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 SS18L1O75177 396 aaPredicted RBP11.98□□□□□ -0.49
MSH5-202ENST00000375740 CTSDP07339 412 aaPredicted RBP11.98□□□□□ -0.49
MSH5-202ENST00000375740 FUT3P21217 361 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 DDTP30046 118 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 GPM6AP51674 278 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 TMEM33P57088 247 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 EIF5AL1Q6IS14 154 aaKnown RBP11.98□□□□□ -0.49
MSH5-202ENST00000375740 OR1J1Q8NGS3 322 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 HPSE2Q8WWQ2 592 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 ERGIC1Q969X5 290 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 SUCNR1Q9BXA5 334 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 DCAF16Q9NXF7 216 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 POMT1Q9Y6A1 747 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 URGCP-MRPS24S4R325 110 aa11.98□□□□□ -0.49
MSH5-202ENST00000375740 A0A087X0M5 115 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 A0A1B0GX30 115 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 OR7C1O76099 320 aaPredicted RBP11.97□□□□□ -0.49
MSH5-202ENST00000375740 IL18BPO95998 194 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 CST4P01036 141 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 CXCL1P09341 107 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 BCL3P20749 454 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 CD82P27701 267 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 TNFSF10P50591 281 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 CCL11P51671 97 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 HMGN3Q15651 99 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 CEACAM21Q3KPI0 293 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 SLC22A25Q6T423 547 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 C1QL4Q86Z23 238 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 OR1K1Q8NGR3 316 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 C2orf50Q96LR7 162 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 ZNF442Q9H7R0 627 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 ZDHHC11Q9H8X9 412 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 BTBD17A6NE02 478 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 RPL12P30050 165 aaKnown RBP11.97□□□□□ -0.49
MSH5-202ENST00000375740 FCGR2CP31995 323 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 SSX2Q16385 188 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 FBXW9Q5XUX1 488 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 Q6ZPA2 131 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 ZDHHC23Q8IYP9 409 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 BCL2L2Q92843 193 aaPredicted RBP11.97□□□□□ -0.49
MSH5-202ENST00000375740 TOMM40LQ969M1 308 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
MSH5-202ENST00000375740 RARRES2Q99969 163 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms