RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 FOXK1P85037 733 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 PEAR1Q5VY43 1037 aaPredicted RBP10.54□□□□□ -0.72
C9orf3-203ENST00000375315 DEGS2Q6QHC5 323 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 GLIPR1L1Q6UWM5 242 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 SMIM15Q7Z3B0 74 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF440Q8IYI8 595 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 C17orf78Q8N4C9 275 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 OR5D14Q8NGL3 314 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 ARHGAP5-AS1Q96IT6 56 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 DEFB126Q9BYW3 111 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 G6PC2Q9NQR9 355 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 MRPL22Q9NWU5 206 aaKnown RBP10.54□□□□□ -0.72
C9orf3-203ENST00000375315 GNG13Q9P2W3 67 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 SLC7A11Q9UPY5 501 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 MRPS28Q9Y2Q9 187 aaKnown RBP10.54□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF878C9JN71 531 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 NTN3O00634 580 aaPredicted RBP10.54□□□□□ -0.72
C9orf3-203ENST00000375315 PITX3O75364 302 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 NXPH2O95156 264 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 WDR25Q64LD2 544 aaPredicted RBP10.54□□□□□ -0.72
C9orf3-203ENST00000375315 WBP2NLQ6ICG8 309 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 CPEB2Q7Z5Q1 589 aaKnown RBP10.54□□□□□ -0.72
C9orf3-203ENST00000375315 SVIPQ8NHG7 77 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 ADIPOR1Q96A54 375 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 FUT9Q9Y231 359 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 RFNGQ9Y644 331 aa10.54□□□□□ -0.72
C9orf3-203ENST00000375315 RTTNQ86VV8 2226 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 FAM221AA4D161 298 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 NKX6-3A6NJ46 265 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 MMP9P14780 707 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 TFPI2P48307 235 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 TMEM50BP56557 158 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 DCAF12Q5T6F0 453 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 SP5Q6BEB4 398 aaPredicted RBP10.53□□□□□ -0.72
C9orf3-203ENST00000375315 DPPA3Q6W0C5 159 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 GRINAQ7Z429 371 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 OR2C3Q8N628 320 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 OR2AJ1Q8NGZ0 328 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 BOD1Q96IK1 185 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 CHRNA10Q9GZZ6 450 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF160Q9HCG1 818 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 KLRF1Q9NZS2 232 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 A0A1W2PN81 502 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 SRSF10O75494 262 aaKnown RBP10.53□□□□□ -0.72
C9orf3-203ENST00000375315 CHRNA7P36544 502 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 ERVS71-1P61550 626 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 ZFP36L1Q07352 338 aaKnown RBP10.53□□□□□ -0.72
C9orf3-203ENST00000375315 TMEM183BQ1AE95 376 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 ZCCHC14Q8WYQ9 949 aaKnown RBP10.53□□□□□ -0.72
C9orf3-203ENST00000375315 SDSLQ96GA7 329 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 SLC35E1Q96K37 410 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF2Q9BSG1 426 aaPredicted RBP10.53□□□□□ -0.72
C9orf3-203ENST00000375315 BANF2Q9H503 90 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 Q9N2K0 584 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 CISD1Q9NZ45 108 aaKnown RBP10.53□□□□□ -0.72
C9orf3-203ENST00000375315 K7EP13 123 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 GALR2O43603 387 aaPredicted RBP10.53□□□□□ -0.72
C9orf3-203ENST00000375315 CNN1P51911 297 aaKnown RBP10.53□□□□□ -0.72
C9orf3-203ENST00000375315 HES3Q5TGS1 186 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 TOMM20LQ6UXN7 152 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 ATG4DQ86TL0 474 aaPredicted RBP10.53□□□□□ -0.72
C9orf3-203ENST00000375315 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.53□□□□□ -0.72
C9orf3-203ENST00000375315 NECAP1Q8NC96 275 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 TECTBQ96PL2 329 aa10.53□□□□□ -0.72
C9orf3-203ENST00000375315 ACACAQ13085 2346 aa10.52□□□□□ -0.72
C9orf3-203ENST00000375315 PRSS37A4D1T9 235 aa10.52□□□□□ -0.72
C9orf3-203ENST00000375315 ZNF732B4DXR9 585 aa10.52□□□□□ -0.72
C9orf3-203ENST00000375315 H7BYZ3 331 aa10.52□□□□□ -0.72
C9orf3-203ENST00000375315 IFI6P09912 130 aa10.52□□□□□ -0.72
C9orf3-203ENST00000375315 CEACAM1P13688 526 aa10.52□□□□□ -0.72
C9orf3-203ENST00000375315 GALR1P47211 349 aa10.52□□□□□ -0.72
C9orf3-203ENST00000375315 ENDOGQ14249 297 aaKnown RBP10.52□□□□□ -0.72
C9orf3-203ENST00000375315 ARL6IP1Q15041 203 aa10.52□□□□□ -0.72
C9orf3-203ENST00000375315 C16orf82Q7Z2V1 217 aa10.52□□□□□ -0.72
C9orf3-203ENST00000375315 HIPK2Q9H2X6 1198 aa10.52□□□□□ -0.72
C9orf3-203ENST00000375315 CALHM2Q9HA72 323 aa10.52□□□□□ -0.72
C9orf3-203ENST00000375315 GPR35Q9HC97 309 aa10.52□□□□□ -0.72
C9orf3-203ENST00000375315 C11orf98E9PRG8 122 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 TMEM225BP0DP42 221 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 BCL2P10415 239 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 IL24Q13007 206 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 PRDX4Q13162 271 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 ADIRFQ15847 76 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 ATP6V1FQ16864 119 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 ACTL10Q5JWF8 245 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 IL22RA1Q8N6P7 574 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 OR10G3Q8NGC4 313 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 MRGPRDQ8TDS7 321 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 OIT3Q8WWZ8 545 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 ADAT3Q96EY9 351 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-203ENST00000375315 B3GAT1Q9P2W7 334 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 MGAQ8IWI9 3026 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 YLPM1P49750 1951 aaKnown RBP10.52□□□□□ -0.73
C9orf3-203ENST00000375315 FRYQ5TBA9 3013 aa10.52□□□□□ -0.73
C9orf3-203ENST00000375315 FAM24AA6NFZ4 105 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 ZFP92A6NM28 416 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 BGLAPP02818 100 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 CD55P08174 381 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 DBHP09172 617 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 WNT5AP41221 380 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms