RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 OR2Z1Q8NG97 314 aa12.51□□□□□ -0.41
LMX1B-202ENST00000373474 PLA2G3Q9NZ20 509 aa12.51□□□□□ -0.41
LMX1B-202ENST00000373474 BRS3P32247 399 aa12.51□□□□□ -0.41
LMX1B-202ENST00000373474 ERASQ7Z444 233 aa12.51□□□□□ -0.41
LMX1B-202ENST00000373474 LILRB1Q8NHL6 650 aaPredicted RBP12.51□□□□□ -0.41
LMX1B-202ENST00000373474 GPR61Q9BZJ8 451 aa12.51□□□□□ -0.41
LMX1B-202ENST00000373474 PIPOXQ9P0Z9 390 aa12.51□□□□□ -0.41
LMX1B-202ENST00000373474 NUMA1Q14980 2115 aa12.51□□□□□ -0.41
LMX1B-202ENST00000373474 CSN3P07498 182 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 PMCHL1Q16048 86 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 ADAT3Q96EY9 351 aaPredicted RBP12.5□□□□□ -0.41
LMX1B-202ENST00000373474 EML2O95834 649 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 HAND1O96004 215 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 COX6CP09669 75 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 SRP14P37108 136 aaKnown RBP12.5□□□□□ -0.41
LMX1B-202ENST00000373474 RPL30P62888 115 aaKnown RBP12.5□□□□□ -0.41
LMX1B-202ENST00000373474 ACER2Q5QJU3 275 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 WDFY1Q8IWB7 410 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 TRMT61AQ96FX7 289 aaKnown RBP12.5□□□□□ -0.41
LMX1B-202ENST00000373474 SARGQ9BW04 601 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 SF3B5Q9BWJ5 86 aaKnown RBP12.5□□□□□ -0.41
LMX1B-202ENST00000373474 PPP1R3EQ9H7J1 279 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 MCM3APO60318 1980 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 MYO16Q9Y6X6 1858 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 SPRY3O43610 288 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 AESQ08117 197 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 ADAD2Q8NCV1 583 aaKnown RBP12.5□□□□□ -0.41
LMX1B-202ENST00000373474 GRAMD2BQ96HH9 432 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 RAB33BQ9H082 229 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 TRDCB7Z8K6 153 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 CSRP3P50461 194 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 GABRA6Q16445 453 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 Q56UQ5 140 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 OR10AC1Q8NH08 325 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 OR2D2Q9H210 308 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 ZFP64Q9NPA5 681 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 C7orf66A4D0T2 115 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 FCGR3BO75015 233 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 DAOP14920 347 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 UBE2L3P68036 154 aaKnown RBP12.5□□□□□ -0.41
LMX1B-202ENST00000373474 WNK3Q9BYP7 1800 aa12.5□□□□□ -0.41
LMX1B-202ENST00000373474 SEC11BP0C7V7 166 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 KHDC1LQ5JSQ8 128 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 DGAT2L7PQ6IED9 249 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 SEBOXQ9HB31 216 aaPredicted RBP12.49□□□□□ -0.41
LMX1B-202ENST00000373474 OR6C3Q9NZP0 311 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 UQCR10Q9UDW1 63 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 ELF5Q9UKW6 265 aaPredicted RBP12.49□□□□□ -0.41
LMX1B-202ENST00000373474 ZMIZ1Q9ULJ6 1067 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 ANKRD31Q8N7Z5 1873 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 MED19A0JLT2 244 aaPredicted RBP12.49□□□□□ -0.41
LMX1B-202ENST00000373474 SNURFLB1AK76 121 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 PERPQ96FX8 193 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 MRPL37Q9BZE1 423 aaKnown RBP12.49□□□□□ -0.41
LMX1B-202ENST00000373474 CA10Q9NS85 328 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 SIRT4Q9Y6E7 314 aaPredicted RBP12.49□□□□□ -0.41
LMX1B-202ENST00000373474 MS4A18H0YCH9 400 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 BTF3P20290 206 aaKnown RBP12.49□□□□□ -0.41
LMX1B-202ENST00000373474 DDTP30046 118 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 HOXA6P31267 233 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 MS4A18Q3C1V0 323 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 SPNS3Q6ZMD2 512 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 PSG11Q9UQ72 335 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 COL4A5P29400 1685 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 SCN4AP35499 1836 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 EPHA8P29322 1005 aaPredicted RBP12.49□□□□□ -0.41
LMX1B-202ENST00000373474 MICBQ29980 383 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 ZNF385CQ66K41 422 aaPredicted RBP12.49□□□□□ -0.41
LMX1B-202ENST00000373474 RAB37Q96AX2 223 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 PRSS27Q9BQR3 290 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 WNT16Q9UBV4 365 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 CRXO43186 299 aaPredicted RBP12.49□□□□□ -0.41
LMX1B-202ENST00000373474 RNF133Q8WVZ7 376 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 MPC1Q9Y5U8 109 aa12.49□□□□□ -0.41
LMX1B-202ENST00000373474 DEFB108AA8MXU0 73 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 TMIGD3P0DMS9 266 aaPredicted RBP12.48□□□□□ -0.41
LMX1B-202ENST00000373474 LIMS1P48059 325 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 EFNB2P52799 333 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 LRRC10Q5BKY1 277 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 SLC35E3Q7Z769 313 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 OR11G2Q8NGC1 345 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 DTD1Q8TEA8 209 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 MISP3Q96FF7 219 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 DMRT1Q9Y5R6 373 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 NRXN2Q9P2S2 1712 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 COL11A1P12107 1806 aaPredicted RBP12.48□□□□□ -0.41
LMX1B-202ENST00000373474 MT-ND6P03923 174 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 HIST1H1EP10412 219 aaKnown RBP12.48□□□□□ -0.41
LMX1B-202ENST00000373474 CEBPDP49716 269 aaPredicted RBP12.48□□□□□ -0.41
LMX1B-202ENST00000373474 RAC3P60763 192 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 POLR2GP62487 172 aaKnown RBP eCLIP12.48□□□□□ -0.41
LMX1B-202ENST00000373474 VSIG4Q9Y279 399 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 CENPVL1A0A0U1RR11 272 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 ZNF260Q3ZCT1 412 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 M0R3E3 92 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 CCL2P13500 99 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 IER3P46695 156 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 PLPPR5Q32ZL2 321 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 SPATA45Q537H7 98 aa12.48□□□□□ -0.41
LMX1B-202ENST00000373474 AMMECR1LQ6DCA0 310 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms