RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 FAM90A2PQ658T7 463 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 DEFB123Q8N688 67 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 HLA-CQ95604 372 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 RBMXL1Q96E39 390 aaKnown RBP12.74□□□□□ -0.37
COL9A2-202ENST00000372748 RSG1Q9BU20 258 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 PDCD6O75340 191 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 NPBWR2P48146 333 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 CNN3Q15417 329 aaKnown RBP12.74□□□□□ -0.37
COL9A2-202ENST00000372748 OR13D1Q8NGV5 346 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 M1APQ8TC57 530 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 MISP3Q96FF7 219 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 SIGLEC12Q96PQ1 595 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 VSIRQ9H7M9 311 aa12.74□□□□□ -0.37
COL9A2-202ENST00000372748 LOC102723971A0A1B0GUV8 181 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 ZNHIT1O43257 154 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 CCL3P10147 92 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 CXCL12P48061 93 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 RPS18P62269 152 aaKnown RBP12.73□□□□□ -0.37
COL9A2-202ENST00000372748 IZUMO4Q1ZYL8 232 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 C10orf128Q5T292 105 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 CALHM1Q8IU99 346 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 FADS6Q8N9I5 356 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 C10orf35Q96D05 121 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 CABLES2Q9BTV7 478 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 C19orf25Q9UFG5 118 aaPredicted RBP12.73□□□□□ -0.37
COL9A2-202ENST00000372748 IGKV1D-13A0A0B4J2D9 117 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 CLDN34H7C241 214 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 SLC31A2O15432 143 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 DKK1O94907 266 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 CD55P08174 381 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 IGKV1-13P0DP09 117 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 EPHA8P29322 1005 aaPredicted RBP12.73□□□□□ -0.37
COL9A2-202ENST00000372748 TMEM267Q0VDI3 215 aaPredicted RBP12.73□□□□□ -0.37
COL9A2-202ENST00000372748 LILRB2Q8N423 598 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 PIGCQ92535 297 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 SPIN2AQ99865 258 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 SPIN2BQ9BPZ2 258 aa12.73□□□□□ -0.37
COL9A2-202ENST00000372748 K7ESF4 209 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 SNRPCP09234 159 aaKnown RBP12.72□□□□□ -0.37
COL9A2-202ENST00000372748 SCTP09683 121 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 HIST1H3AP68431 136 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 H3F3AP84243 136 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 TMEM54Q969K7 222 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 TMEM56Q96MV1 263 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 LRFN1Q9P244 771 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 TMEM56-RWDD3S4R434 201 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 BDP1A6H8Y1 2624 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 TP53I11O14683 189 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 PLA2G5P39877 138 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 TAS2R30P59541 319 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 SRPXP78539 464 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 PCOLCEQ15113 449 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 USF2Q15853 346 aaPredicted RBP12.72□□□□□ -0.37
COL9A2-202ENST00000372748 WDR25Q64LD2 544 aaPredicted RBP12.72□□□□□ -0.37
COL9A2-202ENST00000372748 Q6ZSR3 168 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 NECAP1Q8NC96 275 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 ATP5SQ99766 215 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 RPRMQ9NS64 109 aa12.72□□□□□ -0.37
COL9A2-202ENST00000372748 A0A1B0GU03 582 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 HBE1P02100 147 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 NR2C1P13056 603 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 CRYGSP22914 178 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 ID3Q02535 119 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 HNF4GQ14541 408 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 DAZAP2Q15038 168 aaPredicted RBP12.71□□□□□ -0.37
COL9A2-202ENST00000372748 CLEC12BQ2HXU8 276 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 ZNF468Q5VIY5 522 aaPredicted RBP12.71□□□□□ -0.37
COL9A2-202ENST00000372748 PLCXD3Q63HM9 321 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 MRPL14Q6P1L8 145 aaKnown RBP12.71□□□□□ -0.37
COL9A2-202ENST00000372748 LHFPL2Q6ZUX7 228 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 SLC25A26Q70HW3 274 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 PLPPR1Q8TBJ4 325 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 CCL28Q9NRJ3 127 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 TCFL5Q9UL49 500 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 ZNF407Q9C0G0 2248 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 CELSR3Q9NYQ7 3312 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 LOC102725191A0A1B0GVB3 256 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 B4GALT1P15291 398 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 PAX9P55771 341 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 RBM11P57052 281 aaKnown RBP12.71□□□□□ -0.37
COL9A2-202ENST00000372748 TAS2R60P59551 318 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 MRPS34P82930 218 aaKnown RBP12.71□□□□□ -0.37
COL9A2-202ENST00000372748 ZFP36L1Q07352 338 aaKnown RBP12.71□□□□□ -0.37
COL9A2-202ENST00000372748 EXT1Q16394 746 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 NMSQ5H8A3 153 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 SSX7Q7RTT5 188 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 MAML2Q8IZL2 1156 aaPredicted RBP12.71□□□□□ -0.37
COL9A2-202ENST00000372748 POM121Q96HA1 1249 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 GUCD1Q96NT3 240 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 FAM86C1Q9NVL1 165 aa12.71□□□□□ -0.37
COL9A2-202ENST00000372748 C9J4A7 227 aa12.71□□□□□ -0.38
COL9A2-202ENST00000372748 TUBG1P23258 451 aa12.71□□□□□ -0.38
COL9A2-202ENST00000372748 SSX2Q16385 188 aa12.71□□□□□ -0.38
COL9A2-202ENST00000372748 ZNF787Q6DD87 383 aa12.71□□□□□ -0.38
COL9A2-202ENST00000372748 PTRH2Q9Y3E5 179 aaKnown RBP12.71□□□□□ -0.38
COL9A2-202ENST00000372748 A0A0G2JRQ6 117 aa12.7□□□□□ -0.38
COL9A2-202ENST00000372748 TNFSF11O14788 317 aa12.7□□□□□ -0.38
COL9A2-202ENST00000372748 SYNGR3O43761 229 aa12.7□□□□□ -0.38
COL9A2-202ENST00000372748 CYB5R3P00387 301 aaPredicted RBP12.7□□□□□ -0.38
COL9A2-202ENST00000372748 TK1P04183 234 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms