RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PGPEP1LA6NFU8 196 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 RPL36A-HNRNPH2H7BZ11 118 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 CHST1O43916 411 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 SMPD2O60906 423 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 MT-ATP6P00846 226 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 CTSDP07339 412 aaPredicted RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 HNF1AP20823 631 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 AKT2P31751 481 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 RPL29P47914 159 aaKnown RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 UCP3P55916 312 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 FAM3BP58499 235 aaPredicted RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 NUTF2P61970 127 aaKnown RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 HLA-DRB3P79483 266 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 HOXA4Q00056 320 aaPredicted RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 ARL16Q0P5N6 197 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 PMS2P11Q13670 270 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 PRR31Q5SQ13 230 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 GPR157Q5UAW9 335 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 FAM53AQ6NSI3 398 aaPredicted RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 Q6ZS52 159 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 TMEM256Q8N2U0 113 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 FAM89BQ8N5H3 189 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 COMMD1Q8N668 190 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 OR10J5Q8NHC4 309 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 C18orf12Q96KH6 178 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 SLC46A1Q96NT5 459 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF385AQ96PM9 386 aaKnown RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 HIST1H2AAQ96QV6 131 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 CABLES2Q9BTV7 478 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 LRRC61Q9BV99 259 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 AKIRIN1Q9H9L7 192 aaPredicted RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 PLEKHA2Q9HB19 425 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF160Q9HCG1 818 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 SIRT7Q9NRC8 400 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 CUTCQ9NTM9 273 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 CRIM1Q9NZV1 1036 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 FUT9Q9Y231 359 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 THADAQ6YHU6 1953 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 FER1L5A0AVI2 2057 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 LIPT2A6NK58 231 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 HSPB2A8KAH6 182 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 CEBPZOSA8MTT3 80 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 TNFP01375 233 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 IGHV3-9P01782 118 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 IGHV4-34P06331 123 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 CELA2AP08217 269 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 SCTP09683 121 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 MAS1LP35410 378 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 OR1D5P58170 312 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 RPS18P62269 152 aaKnown RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 TRA2AQ13595 282 aaKnown RBP eCLIP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 HSPB2Q16082 182 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 ASPHD1Q5U4P2 390 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 SLC23A3Q6PIS1 610 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF66Q6ZN08 573 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF818PQ6ZRF7 136 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 ZDHHC23Q8IYP9 409 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 PLPP5Q8NEB5 264 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 OR51H1Q8NH63 302 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 OR1L3Q8NH93 324 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 RNASE11Q8TAA1 199 aaKnown RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 LMX1AQ8TE12 382 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 SSC4DQ8WTU2 575 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 THRSPQ92748 146 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 TMEM204Q9BSN7 226 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 RBM24Q9BX46 236 aaKnown RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 MRPL13Q9BYD1 178 aaKnown RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 OR51B6Q9H340 312 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 RPRMQ9NS64 109 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 SLC7A10Q9NS82 523 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 LRFN1Q9P244 771 aa4.67□□□□□ -1.66
ATG4A-204ENST00000372246 ERRFI1Q9UJM3 462 aaPredicted RBP4.67□□□□□ -1.66
ATG4A-204ENST00000372246 A0A0U1RQK1 487 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 FRMD6-AS1P0C7T7 363 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 METTL15P1P0C7V9 234 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 CCL2P13500 99 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 FOSL2P15408 326 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 SELEP16581 610 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 SLC6A8P48029 635 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 DAP3P51398 398 aaKnown RBP4.66□□□□□ -1.66
ATG4A-204ENST00000372246 RAB1AP62820 205 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 ZXDAP98168 799 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 DLX2Q07687 328 aaPredicted RBP4.66□□□□□ -1.66
ATG4A-204ENST00000372246 GNMTQ14749 295 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 TCEAL6Q6IPX3 200 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 IGF2-ASQ6U949 168 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 TCF23Q7RTU1 214 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 C16orf82Q7Z2V1 217 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 TBC1D26Q86UD7 250 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 Q8NFD4 153 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 OR10G3Q8NGC4 313 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 OR4D5Q8NGN0 318 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 OR14L1PQ8NHC6 308 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 PLPPR1Q8TBJ4 325 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 SYT3Q9BQG1 590 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 NKX2-4Q9H2Z4 354 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 RBKSQ9H477 322 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 KLRF1Q9NZS2 232 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 SEMA5BQ9P283 1151 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 TP53TG5Q9Y2B4 290 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms