RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 TBC1D28Q2M2D7 210 aa17.53■□□□□ 0.4
VEGFA-204ENST00000372064 PUSL1Q8N0Z8 303 aaKnown RBP17.53■□□□□ 0.4
VEGFA-204ENST00000372064 LYPD6BQ8NI32 183 aa17.53■□□□□ 0.4
VEGFA-204ENST00000372064 WFDC1Q9HC57 220 aa17.53■□□□□ 0.4
VEGFA-204ENST00000372064 ASCL3Q9NQ33 180 aa17.53■□□□□ 0.4
VEGFA-204ENST00000372064 PRRC2CQ9Y520 2896 aaKnown RBP17.53■□□□□ 0.4
VEGFA-204ENST00000372064 GUCA2BQ16661 112 aa17.53■□□□□ 0.4
VEGFA-204ENST00000372064 PCSK4Q6UW60 755 aa17.53■□□□□ 0.4
VEGFA-204ENST00000372064 SELENOHQ8IZQ5 122 aaKnown RBP17.53■□□□□ 0.4
VEGFA-204ENST00000372064 ESPL1Q14674 2120 aa17.53■□□□□ 0.4
VEGFA-204ENST00000372064 J3QT63 122 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 HS3ST1O14792 307 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 SLC34A2O95436 690 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 IGHV1-2P23083 117 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 SPIN3Q5JUX0 258 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 CLEC9AQ6UXN8 241 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 RDH5Q92781 318 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 SEC11CQ9BY50 192 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 UBE2J1Q9Y385 318 aaPredicted RBP17.52■□□□□ 0.4
VEGFA-204ENST00000372064 NKX2-6A6NCS4 301 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 SPAG16Q8N0X2 631 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 GINS3Q9BRX5 216 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 TREM1Q9NP99 234 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 GLRX2Q9NS18 164 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 CLCF1Q9UBD9 225 aa17.52■□□□□ 0.4
VEGFA-204ENST00000372064 DUXBA0A1W2PPF3 345 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 F8W036 122 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 LYZL6O75951 148 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 IGHG3P01860 377 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 MUC1P15941 1255 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-204ENST00000372064 IDH3GP51553 393 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-204ENST00000372064 GPHA2Q96T91 129 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 TMEM231Q9H6L2 316 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 DLL3Q9NYJ7 618 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 CNOT1A5YKK6 2376 aaKnown RBP17.51■□□□□ 0.39
VEGFA-204ENST00000372064 CLEC18AA5D8T8 446 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 SMPD2O60906 423 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 SEC11BP0C7V7 166 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 UCP1P25874 307 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 F2RL1P55085 397 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 FAM76BQ5HYJ3 339 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 ZNF695Q8IW36 515 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 CLEC18CQ8NCF0 446 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 LILRB1Q8NHL6 650 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-204ENST00000372064 TRIB1Q96RU8 372 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 TLNRD1Q9H1K6 362 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 ASPMQ8IZT6 3477 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 BORCS7-ASMTA0A0B4J1R7 106 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 ERVS71-1P61550 626 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 Q6P435 159 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 CABLES2Q9BTV7 478 aa17.51■□□□□ 0.39
VEGFA-204ENST00000372064 GNMTQ14749 295 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 ZNF169Q14929 603 aaPredicted RBP17.5■□□□□ 0.39
VEGFA-204ENST00000372064 WDR86Q86TI4 376 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 BOD1Q96IK1 185 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 SPIN2AQ99865 258 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 SPIN2BQ9BPZ2 258 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 NRIP2Q9BQI9 281 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 RTL8AQ9BWD3 113 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 OR2J1Q9GZK6 312 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 CCL28Q9NRJ3 127 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 FAM212BQ9NTI7 297 aaPredicted RBP17.5■□□□□ 0.39
VEGFA-204ENST00000372064 SPP1P10451 314 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 UBE2NP61088 152 aaKnown RBP17.5■□□□□ 0.39
VEGFA-204ENST00000372064 ZNF324BQ6AW86 544 aaPredicted RBP17.5■□□□□ 0.39
VEGFA-204ENST00000372064 Q6ZRG5 221 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 ABHD14BQ96IU4 210 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 FAM96BQ9Y3D0 163 aa17.5■□□□□ 0.39
VEGFA-204ENST00000372064 LRP5LA4QPB2 252 aa17.49■□□□□ 0.39
VEGFA-204ENST00000372064 CD5P06127 495 aa17.49■□□□□ 0.39
VEGFA-204ENST00000372064 HLA-DRB3P79483 266 aa17.49■□□□□ 0.39
VEGFA-204ENST00000372064 NMSQ5H8A3 153 aa17.49■□□□□ 0.39
VEGFA-204ENST00000372064 PURGQ9UJV8 347 aaKnown RBP17.49■□□□□ 0.39
VEGFA-204ENST00000372064 HSD17B6O14756 317 aa17.49■□□□□ 0.39
VEGFA-204ENST00000372064 PPP1CBP62140 327 aa17.49■□□□□ 0.39
VEGFA-204ENST00000372064 NHLH2Q02577 135 aa17.49■□□□□ 0.39
VEGFA-204ENST00000372064 TGFBR3Q03167 851 aa17.49■□□□□ 0.39
VEGFA-204ENST00000372064 MRPL49Q13405 166 aaKnown RBP17.49■□□□□ 0.39
VEGFA-204ENST00000372064 GUSBP1Q15486 140 aa17.49■□□□□ 0.39
VEGFA-204ENST00000372064 CLRN3Q8NCR9 226 aa17.49■□□□□ 0.39
VEGFA-204ENST00000372064 IL22RA2Q969J5 263 aa17.49■□□□□ 0.39
VEGFA-204ENST00000372064 H0Y980 276 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 DANCRP0C864 163 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 ERVK11-1P61568 191 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 FAM214BQ7L5A3 538 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 CMTM1Q8IZ96 169 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 H1FOOQ8IZA3 346 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-204ENST00000372064 OR5D13Q8NGL4 314 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 CDH20Q9HBT6 801 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 TREM2Q9NZC2 230 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 RNASEK-C17orf49H0YIS7 233 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 TOR1AO14656 332 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 DEGS1O15121 323 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 NKX2-1P43699 371 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-204ENST00000372064 ALKBH6Q3KRA9 238 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 OR2W1Q9Y3N9 320 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 NPIPB11E5RHQ5 1161 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 ZNF44P15621 663 aa17.48■□□□□ 0.39
VEGFA-204ENST00000372064 EWSR1Q01844 656 aaKnown RBP eCLIP17.48■□□□□ 0.393e-7■■■□□ 16.8
VEGFA-204ENST00000372064 IGFL2Q6UWQ7 119 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms