RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SEMA7AO75326 666 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 COL10A1Q03692 680 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 CEACAM21Q3KPI0 293 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 PHYHD1Q5SRE7 291 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 LIAT1Q6ZQX7 453 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 ST8SIA2Q92186 375 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 TMEM231Q9H6L2 316 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 CHODLQ9H9P2 273 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 KLHDC2Q9Y2U9 406 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 V9GYS6 101 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 SCGB1D1O95968 90 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 GYPAP02724 150 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 SMIM17P0DL12 118 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 ATP5J2P56134 94 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 NAAAQ02083 359 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 RAB32Q13637 225 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 SURF2Q15527 256 aaPredicted RBP12.82□□□□□ -0.36
NDC1-201ENST00000371429 SLC25A47Q6Q0C1 308 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 SLC16A12Q6ZSM3 486 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 SHISA5Q8N114 240 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 GUCD1Q96NT3 240 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 CCL28Q9NRJ3 127 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 ANKRD20A5PA0PJZ0 165 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 SOX15O60248 233 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 GNG7O60262 68 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 GAPTQ8N292 157 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 PCDHGA9Q9Y5G4 932 aaKnown RBP12.82□□□□□ -0.36
NDC1-201ENST00000371429 ERVFRD-1P60508 538 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 RHOBP62745 196 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 ZNF574Q6ZN55 896 aaPredicted RBP12.82□□□□□ -0.36
NDC1-201ENST00000371429 ZNF788Q6ZQV5 615 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 APCDD1LQ8NCL9 501 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 SLC25A22Q9H936 323 aa12.82□□□□□ -0.36
NDC1-201ENST00000371429 MGST3O14880 152 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 LIMS1P48059 325 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 FAM3AP98173 230 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 CKAP5Q14008 2032 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 OR2C3Q8N628 320 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 ZNF596Q8TC21 504 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 RPS4Y2Q8TD47 263 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 SIGLEC12Q96PQ1 595 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 CYB5R1Q9UHQ9 305 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 FAM24AA6NFZ4 105 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 MS4A18H0YCH9 400 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 CLDN14O95500 239 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 LYZP61626 148 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 MS4A18Q3C1V0 323 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 GPX7Q96SL4 187 aaPredicted RBP12.81□□□□□ -0.36
NDC1-201ENST00000371429 CTDSP1Q9GZU7 261 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 DOK5Q9P104 306 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 SDK2Q58EX2 2172 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 ORM2P19652 201 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 TCEAL7Q9BRU2 100 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 ZDHHC8Q9ULC8 765 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 RPL36A-HNRNPH2H7BZ11 118 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 CRHP06850 196 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 TPRX1Q8N7U7 411 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 SRXN1Q9BYN0 137 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 OR2W1Q9Y3N9 320 aa12.81□□□□□ -0.36
NDC1-201ENST00000371429 A0A1W2PNV4 684 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 RAG2P55895 527 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 OR4A4PQ8NGN8 299 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 SLC45A2Q9UMX9 530 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 RBBP6Q7Z6E9 1792 aaKnown RBP12.8□□□□□ -0.36
NDC1-201ENST00000371429 NQO2P16083 231 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 PLAC9Q5JTB6 97 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 NECAP1Q8NC96 275 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 ZNF714Q96N38 554 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 ALPK2Q86TB3 2170 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 CST4P01036 141 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 REG1BP48304 166 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 RBM11P57052 281 aaKnown RBP12.8□□□□□ -0.36
NDC1-201ENST00000371429 NANOS3P60323 173 aaKnown RBP12.8□□□□□ -0.36
NDC1-201ENST00000371429 ZNF658BQ4V348 819 aaPredicted RBP12.8□□□□□ -0.36
NDC1-201ENST00000371429 OR5R1Q8NH85 324 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 AKAP6Q13023 2319 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 A0A1W2PPE3 182 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 VDAC1P21796 283 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 KIR3DL2P43630 455 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 OR51I2Q9H344 312 aa12.8□□□□□ -0.36
NDC1-201ENST00000371429 FOXD3Q9UJU5 478 aaPredicted RBP12.8□□□□□ -0.36
NDC1-201ENST00000371429 GREB1LQ9C091 1923 aaPredicted RBP12.79□□□□□ -0.36
NDC1-201ENST00000371429 CD200P41217 278 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 TEX30Q5JUR7 227 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 C14orf79Q96F83 325 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 SPTAN1Q13813 2472 aaKnown RBP12.79□□□□□ -0.36
NDC1-201ENST00000371429 SYNGR2O43760 224 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 OR2C1O95371 312 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 RFPL3SP0C7P2 107 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 SPNP16150 400 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 PPP1CCP36873 323 aaKnown RBP12.79□□□□□ -0.36
NDC1-201ENST00000371429 IL13RA2Q14627 380 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 ST3GAL2Q16842 350 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 DYRK2Q92630 601 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 SYNGR1O43759 233 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 SLC25A5P05141 298 aaKnown RBP12.79□□□□□ -0.36
NDC1-201ENST00000371429 POLR2GP62487 172 aaKnown RBP eCLIP12.79□□□□□ -0.36
NDC1-201ENST00000371429 PRNDQ9UKY0 176 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 ZNF826PQ6ZT77 177 aa12.79□□□□□ -0.36
NDC1-201ENST00000371429 TEX29Q8N6K0 151 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms