RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 PEX11GQ96HA9 241 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 CCDC32Q9BV29 185 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 FAM234AQ9H0X4 552 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 ABCG5Q9H222 651 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 BEX1Q9HBH7 125 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 ZNF224Q9NZL3 707 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 C19orf25Q9UFG5 118 aaPredicted RBP3.26□□□□□ -1.89
MCF2-203ENST00000370576 RARRES3Q9UL19 164 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 SLC7A11Q9UPY5 501 aa3.26□□□□□ -1.89
MCF2-203ENST00000370576 SIRT4Q9Y6E7 314 aaPredicted RBP3.26□□□□□ -1.89
MCF2-203ENST00000370576 IDSB3KWA1 339 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 WNT9BO14905 357 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 FSTL3O95633 263 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 OPN1SWP03999 348 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 P04436 131 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 TRAPPC2P0DI81 140 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 TRAPPC2BP0DI82 140 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 ZNF708P17019 499 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 MAP2K4P45985 399 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 MEOX1P50221 254 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 NUDT6P53370 316 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 IFITM3Q01628 133 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 RAB31Q13636 194 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 GINS1Q14691 196 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 TGIF1Q15583 401 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 GABRA6Q16445 453 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 SOHLH1Q5JUK2 328 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 SFXN4Q6P4A7 337 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 FAM220AQ7Z4H9 259 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 GLCCI1Q86VQ1 547 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 CMTM4Q8IZR5 234 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 COX18Q8N8Q8 333 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 FAM98AQ8NCA5 519 aaKnown RBP3.25□□□□□ -1.89
MCF2-203ENST00000370576 OR11H4Q8NGC9 324 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 OR5J2Q8NH18 312 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 ABHD3Q8WU67 409 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 CT55Q8WUE5 264 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 UPRTQ96BW1 309 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 C1orf147Q96MC9 270 aaPredicted RBP3.25□□□□□ -1.89
MCF2-203ENST00000370576 AGMATQ9BSE5 352 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 FNDC4Q9H6D8 234 aaPredicted RBP3.25□□□□□ -1.89
MCF2-203ENST00000370576 DOCK10Q96BY6 2186 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 MPDZO75970 2070 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 HCFC1P51610 2035 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 ZFAND5O76080 213 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 HLA-DQA2P01906 255 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 C4BPBP20851 252 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 CDKN2AP42771 156 aaKnown RBP3.25□□□□□ -1.89
MCF2-203ENST00000370576 CX3CR1P49238 355 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 LHX2P50458 406 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 RPS7P62081 194 aaKnown RBP3.25□□□□□ -1.89
MCF2-203ENST00000370576 SSBP1Q04837 148 aaKnown RBP3.25□□□□□ -1.89
MCF2-203ENST00000370576 MPPED2Q15777 294 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 ZNF79Q15937 498 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 Q6ZS49 121 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 LANCL3Q6ZV70 420 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 GAPTQ8N292 157 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 OR6M1Q8NGM8 313 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 GATAD1Q8WUU5 269 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 ASB17Q8WXJ9 295 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 TSSK6Q9BXA6 273 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 FAM206AQ9NX38 181 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 MED31Q9Y3C7 131 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 DNAH14Q0VDD8 3507 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 A0A0X1KG70 313 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 MYOCOSA0A1B0GUC4 107 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 CIB4A0PJX0 185 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 SPRY3O43610 288 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 SLC19A2O60779 497 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 CLIC3O95833 236 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 CELP19835 753 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 NR4A2P43354 598 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 FAM27E3Q08E93 113 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 ST3GAL4Q11206 333 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 C3AR1Q16581 482 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 ZNF181Q2M3W8 571 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 C16orf82Q7Z2V1 217 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 THAP8Q8NA92 274 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 DUSP18Q8NEJ0 188 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 OR4F15Q8NGB8 312 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 S100ZQ8WXG8 99 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 GFM1Q96RP9 751 aaKnown RBP3.25□□□□□ -1.89
MCF2-203ENST00000370576 ACTR3CQ9C0K3 210 aaPredicted RBP3.25□□□□□ -1.89
MCF2-203ENST00000370576 Q9UF83 564 aa3.25□□□□□ -1.89
MCF2-203ENST00000370576 OR4C45A6NMZ5 311 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 EFCAB9A8MZ26 197 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 TP53I11O14683 189 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 PIN1P1O15428 100 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 DIRAS1O95057 198 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 MMP7P09237 267 aaPredicted RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 SERPINA2P20848 420 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 GDF1P27539 372 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 OR2B8PP59922 312 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 RPL27P61353 136 aaKnown RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 SELENOTP62341 195 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 RPL8P62917 257 aaKnown RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 ATXN7L3Q14CW9 347 aaPredicted RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 ZNF542PQ5EBM4 170 aa3.24□□□□□ -1.89
MCF2-203ENST00000370576 RPL22L1Q6P5R6 122 aaKnown RBP3.24□□□□□ -1.89
MCF2-203ENST00000370576 SSX7Q7RTT5 188 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms