RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 PPP1CBP62140 327 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 ID3Q02535 119 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 DAZAP2Q15038 168 aaPredicted RBP8.73□□□□□ -1.01
TPM3-209ENST00000368527 IGSF11Q5DX21 431 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 C9orf135Q5VTT2 229 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 IGFL2Q6UWQ7 119 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 Q6ZRG5 221 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 PIP4P1Q86T03 277 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 H1FOOQ8IZA3 346 aaPredicted RBP8.73□□□□□ -1.01
TPM3-209ENST00000368527 TCTEX1D1Q8N7M0 179 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 FAM169BQ8N8A8 192 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 MRPL30Q8TCC3 161 aaKnown RBP8.73□□□□□ -1.01
TPM3-209ENST00000368527 SECTM1Q8WVN6 248 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 LSM10Q969L4 123 aaKnown RBP8.73□□□□□ -1.01
TPM3-209ENST00000368527 SARAFQ96BY9 339 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 RAB40CQ96S21 281 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 TP53RKQ96S44 253 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 HIPK2Q9H2X6 1198 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 ZNF552Q9H707 407 aaPredicted RBP8.73□□□□□ -1.01
TPM3-209ENST00000368527 LYRM2Q9NU23 88 aaPredicted RBP8.73□□□□□ -1.01
TPM3-209ENST00000368527 LIN7CQ9NUP9 197 aaKnown RBP8.73□□□□□ -1.01
TPM3-209ENST00000368527 CLCF1Q9UBD9 225 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 RCL1Q9Y2P8 373 aaKnown RBP8.73□□□□□ -1.01
TPM3-209ENST00000368527 TECTAO75443 2155 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 SDK2Q58EX2 2172 aa8.73□□□□□ -1.01
TPM3-209ENST00000368527 NCKAP5O14513 1909 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 ARGFXA6NJG6 315 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 KCNAB3O43448 404 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 NGFP01138 241 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 HBE1P02100 147 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 SERPINE2P07093 398 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 CBR1P16152 277 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 ZNF14P17017 642 aaPredicted RBP8.72□□□□□ -1.01
TPM3-209ENST00000368527 F2RP25116 425 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 LPAR6P43657 344 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 RPL23AP62750 156 aaKnown RBP8.72□□□□□ -1.01
TPM3-209ENST00000368527 EWSR1Q01844 656 aaKnown RBP eCLIP8.72□□□□□ -1.01
TPM3-209ENST00000368527 ZNF146Q15072 292 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 RSPO4Q2I0M5 234 aaPredicted RBP8.72□□□□□ -1.01
TPM3-209ENST00000368527 EIF2S3LQ2VIR3 472 aaKnown RBP8.72□□□□□ -1.01
TPM3-209ENST00000368527 NMSQ5H8A3 153 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 BRICD5Q6PL45 260 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 MEX3BQ6ZN04 569 aaKnown RBP8.72□□□□□ -1.01
TPM3-209ENST00000368527 Q6ZT83 130 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 FAM214BQ7L5A3 538 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 STX12Q86Y82 276 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 NAXEQ8NCW5 288 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 DMBX1Q8NFW5 382 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 DYRK2Q92630 601 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 WNT2BQ93097 391 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 FGF23Q9GZV9 251 aaPredicted RBP8.72□□□□□ -1.01
TPM3-209ENST00000368527 DEFB127Q9H1M4 99 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 C11orf1Q9H5F2 150 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 DLL3Q9NYJ7 618 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 CACFD1Q9UGQ2 172 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 PRSS50Q9UI38 385 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 RNF150Q9ULK6 438 aa8.72□□□□□ -1.01
TPM3-209ENST00000368527 TRAV24A0A0B4J272 114 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 NKX2-6A6NCS4 301 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 ZNF891A8MT65 544 aaPredicted RBP8.71□□□□□ -1.02
TPM3-209ENST00000368527 CDRT15L2A8MXV6 281 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 FAM90A26D6RGX4 464 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.71□□□□□ -1.02
TPM3-209ENST00000368527 SYNGR1O43759 233 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 SMPD2O60906 423 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 PGLYRP1O75594 196 aaPredicted RBP8.71□□□□□ -1.02
TPM3-209ENST00000368527 LY86O95711 162 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 PRH1P02810 166 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 SCTP09683 121 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 SFTA3P0C7M3 94 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 PGA5P0DJD9 388 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 CEACAM1P13688 526 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 ZNF44P15621 663 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 MUC1P15941 1255 aaPredicted RBP8.71□□□□□ -1.02
TPM3-209ENST00000368527 TAS2R30P59541 319 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 ERVK11-1P61568 191 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 HIKESHIQ53FT3 197 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 ZNF324BQ6AW86 544 aaPredicted RBP8.71□□□□□ -1.02
TPM3-209ENST00000368527 Q6P435 159 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 TRAT1Q6PIZ9 186 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 ZNF497Q6ZNH5 498 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 ZNF818PQ6ZRF7 136 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 FAM219AQ8IW50 185 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 PUSL1Q8N0Z8 303 aaKnown RBP8.71□□□□□ -1.02
TPM3-209ENST00000368527 OR10V1Q8NGI7 309 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 OR11L1Q8NGX0 322 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 BCL2L14Q9BZR8 327 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 MS4A7Q9GZW8 240 aaPredicted RBP8.71□□□□□ -1.02
TPM3-209ENST00000368527 SEBOXQ9HB31 216 aaPredicted RBP8.71□□□□□ -1.02
TPM3-209ENST00000368527 SMCO4Q9NRQ5 59 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 C19orf12Q9NSK7 152 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 KCNIP1Q9NZI2 227 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 COQ3Q9NZJ6 369 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 ZNF581Q9P0T4 197 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 TAAR3PQ9P1P4 343 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 SPRR3Q9UBC9 169 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 WIPI2Q9Y4P8 454 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 MED12Q93074 2177 aa8.71□□□□□ -1.02
TPM3-209ENST00000368527 ZNF503-AS2A6NEH8 195 aa8.7□□□□□ -1.02
TPM3-209ENST00000368527 PRR33A8MZF0 331 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms