RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 FAM169BQ8N8A8 192 aa21.08■□□□□ 0.97
CLK2-203ENST00000368361 PLPPR1Q8TBJ4 325 aa21.08■□□□□ 0.97
CLK2-203ENST00000368361 TUBD1Q9UJT1 453 aa21.08■□□□□ 0.97
CLK2-203ENST00000368361 MPPED1O15442 326 aa21.07■□□□□ 0.96
CLK2-203ENST00000368361 HLA-DRB3P79483 266 aa21.07■□□□□ 0.96
CLK2-203ENST00000368361 HOXA4Q00056 320 aaPredicted RBP21.07■□□□□ 0.96
CLK2-203ENST00000368361 NAAAQ02083 359 aa21.07■□□□□ 0.96
CLK2-203ENST00000368361 TOR2AQ5JU69 321 aa21.07■□□□□ 0.96
CLK2-203ENST00000368361 SPIN3Q5JUX0 258 aa21.07■□□□□ 0.96
CLK2-203ENST00000368361 MBNL2Q5VZF2 373 aaKnown RBP21.07■□□□□ 0.96
CLK2-203ENST00000368361 C18orf12Q96KH6 178 aa21.07■□□□□ 0.96
CLK2-203ENST00000368361 ZNF83P51522 516 aa21.07■□□□□ 0.96
CLK2-203ENST00000368361 FAM74A1Q5RGS3 127 aa21.07■□□□□ 0.96
CLK2-203ENST00000368361 ZNF565Q8N9K5 539 aa21.07■□□□□ 0.96
CLK2-203ENST00000368361 LHFPL5Q8TAF8 219 aa21.07■□□□□ 0.96
CLK2-203ENST00000368361 CXXC4Q9H2H0 198 aa21.07■□□□□ 0.96
CLK2-203ENST00000368361 TRAV39A0A0B4J263 110 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 C3orf85A0A1B0GTC6 90 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 TIMM23BQ5SRD1 257 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 ZNF324BQ6AW86 544 aaPredicted RBP21.06■□□□□ 0.96
CLK2-203ENST00000368361 GAPTQ8N292 157 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 OR4A4PQ8NGN8 299 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 CNTNAP3BQ96NU0 1288 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 CNTNAP3Q9BZ76 1288 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 HES4Q9HCC6 221 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 SH2D1BO14796 132 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 MDH2P40926 338 aaKnown RBP21.06■□□□□ 0.96
CLK2-203ENST00000368361 AANATQ16613 207 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 PRAMEF6Q5VXH4 476 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 TBC1D26Q86UD7 250 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 LDLRAD3Q86YD5 345 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 LGI3Q8N145 548 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 KIRREL1Q96J84 757 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 AQP10Q96PS8 301 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 SLC5A7Q9GZV3 580 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 TREM2Q9NZC2 230 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 OR14J1Q9UGF5 321 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 PCDHB10Q9UN67 800 aa21.06■□□□□ 0.96
CLK2-203ENST00000368361 ACACAQ13085 2346 aa21.05■□□□□ 0.96
CLK2-203ENST00000368361 WNT9BO14905 357 aa21.05■□□□□ 0.96
CLK2-203ENST00000368361 CEACAM8P31997 349 aaPredicted RBP21.05■□□□□ 0.96
CLK2-203ENST00000368361 CEBPDP49716 269 aaPredicted RBP21.05■□□□□ 0.96
CLK2-203ENST00000368361 ZNF497Q6ZNH5 498 aa21.05■□□□□ 0.96
CLK2-203ENST00000368361 FAM185AQ8N0U4 392 aa21.05■□□□□ 0.96
CLK2-203ENST00000368361 GPHA2Q96T91 129 aa21.05■□□□□ 0.96
CLK2-203ENST00000368361 SFXN3Q9BWM7 321 aa21.05■□□□□ 0.96
CLK2-203ENST00000368361 I3L521 148 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 M0R1B8 84 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 ACAA1P09110 424 aaPredicted RBP21.04■□□□□ 0.96
CLK2-203ENST00000368361 NUP62P37198 522 aaPredicted RBP21.04■□□□□ 0.96
CLK2-203ENST00000368361 SLX1AQ9BQ83 275 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 hCG_1807616A0A1W2PRN6 198 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 A6NLC8 198 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 GPR31O00270 319 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 HSD17B6O14756 317 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 P2RX3P56373 397 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 MEX3BQ6ZN04 569 aaKnown RBP21.04■□□□□ 0.96
CLK2-203ENST00000368361 PDZD9Q8IXQ8 264 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 OR10J5Q8NHC4 309 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 IL1F10Q8WWZ1 152 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 CCL28Q9NRJ3 127 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 UFSP2Q9NUQ7 469 aa21.04■□□□□ 0.96
CLK2-203ENST00000368361 CUL9Q8IWT3 2517 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 SCGB1D2O95969 90 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 HAND1O96004 215 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 MSMPQ1L6U9 139 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 SHEQ5VZ18 495 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 SLC35G3Q8N808 338 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 PHYHIPLQ96FC7 376 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 CABLES2Q9BTV7 478 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 REG4Q9BYZ8 158 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 TLNRD1Q9H1K6 362 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 SLC25A32Q9H2D1 315 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 CYTL1Q9NRR1 136 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 DNAJB11Q9UBS4 358 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 LSM5Q9Y4Y9 91 aaKnown RBP21.03■□□□□ 0.96
CLK2-203ENST00000368361 H7C1Q1 480 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 DEDDO75618 318 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 RND3P61587 244 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 WDR82Q6UXN9 313 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 C1orf174Q8IYL3 243 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 PRR18Q8N4B5 295 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 Q8NA96 180 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 TMEM222Q9H0R3 208 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 TRAPPC2LQ9UL33 140 aa21.03■□□□□ 0.96
CLK2-203ENST00000368361 TDGF1P3P51864 188 aa21.02■□□□□ 0.96
CLK2-203ENST00000368361 FIP1L1Q6UN15 594 aaKnown RBP21.02■□□□□ 0.96
CLK2-203ENST00000368361 CISD2Q8N5K1 135 aaKnown RBP21.02■□□□□ 0.96
CLK2-203ENST00000368361 STOML3Q8TAV4 291 aa21.02■□□□□ 0.96
CLK2-203ENST00000368361 MED9Q9NWA0 146 aa21.02■□□□□ 0.96
CLK2-203ENST00000368361 SDHAF2Q9NX18 166 aa21.02■□□□□ 0.96
CLK2-203ENST00000368361 FBXO9Q9UK97 447 aaPredicted RBP21.02■□□□□ 0.96
CLK2-203ENST00000368361 C1QTNF9BB2RNN3 333 aa21.02■□□□□ 0.95
CLK2-203ENST00000368361 TEX46H3BTG2 121 aa21.02■□□□□ 0.95
CLK2-203ENST00000368361 PSPNO60542 156 aa21.02■□□□□ 0.95
CLK2-203ENST00000368361 TMEM268Q5VZI3 342 aa21.02■□□□□ 0.95
CLK2-203ENST00000368361 LRP11Q86VZ4 500 aa21.02■□□□□ 0.95
CLK2-203ENST00000368361 H1FOOQ8IZA3 346 aaPredicted RBP21.02■□□□□ 0.95
CLK2-203ENST00000368361 OR1A1Q9P1Q5 309 aa21.02■□□□□ 0.95
CLK2-203ENST00000368361 OR2W1Q9Y3N9 320 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms