RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 THYN1Q9P016 225 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 UFC1Q9Y3C8 167 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CTSVO60911 334 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 LIPFP07098 398 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 PRDM14Q9GZV8 571 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 PLEKHB1Q9UF11 243 aaPredicted RBP6.28□□□□□ -1.4
SPTA1-201ENST00000368147 R4GMQ9 66 aa6.28□□□□□ -1.4
SPTA1-201ENST00000368147 CTDSP2O14595 271 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 CR2P20023 1033 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 MTNR1BP49286 362 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 SLC35B1P78383 322 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 FOXO1Q12778 655 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 POU2AF1Q16633 256 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 XKR7Q5GH72 579 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 CYHR1Q6ZMK1 362 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 APOBEC3DQ96AK3 386 aaPredicted RBP6.27□□□□□ -1.41
SPTA1-201ENST00000368147 OR6C3Q9NZP0 311 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 TRAPPC4Q9Y296 219 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 BRCA1P38398 1863 aaKnown RBP6.27□□□□□ -1.41
SPTA1-201ENST00000368147 TMEM30CPA0ZSE6 113 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 MFSD2BA6NFX1 497 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 TMEM210A6NLX4 147 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 IGLV3-27P01718 113 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 NPBWR2P48146 333 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 SNRPNP63162 240 aaKnown RBP6.27□□□□□ -1.41
SPTA1-201ENST00000368147 TEX29Q8N6K0 151 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 RHNO1Q9BSD3 238 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 JAM3Q9BX67 310 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 FAM60AQ9NP50 221 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 A0A087WUJ7 227 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 RAB29O14966 203 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 PF4P02776 101 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 CD37P11049 281 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 ZNF32P17041 273 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 GP2P55259 537 aaKnown RBP6.27□□□□□ -1.41
SPTA1-201ENST00000368147 TOMM34Q15785 309 aaPredicted RBP6.27□□□□□ -1.41
SPTA1-201ENST00000368147 IL22RA2Q969J5 263 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 RAXQ9Y2V3 346 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 A0A0A6YYD5 115 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 ARNTLO00327 626 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 SPINK4O60575 86 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 KIR3DL2P43630 455 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 VMA21Q3ZAQ7 101 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 C1orf185Q5T7R7 199 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 OR5R1Q8NH85 324 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 NT5CQ8TCD5 201 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 NUDCD2Q8WVJ2 157 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 MVB12AQ96EY5 273 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 HIST1H4GQ99525 98 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.27□□□□□ -1.411e-6■■■□□ 15.3
SPTA1-201ENST00000368147 IGKV3D-11A0A0A0MRZ8 115 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 NPIPB6E9PJ23 425 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 NGFP01138 241 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 IGKV3-11P04433 115 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 SH2D5Q6ZV89 423 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 SSX8Q7RTT4 187 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 NRARPQ7Z6K4 114 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 EDARADDQ8WWZ3 215 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 RBFOX2O43251 390 aaKnown RBP eCLIP6.27□□□□□ -1.413e-11■■□□□ 11.5
SPTA1-201ENST00000368147 C1QBP02746 253 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 GABRA1P14867 456 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 ATP5J2P56134 94 aa6.27□□□□□ -1.41
SPTA1-201ENST00000368147 ELF5Q9UKW6 265 aaPredicted RBP6.27□□□□□ -1.41
SPTA1-201ENST00000368147 SERPINE3A8MV23 424 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 FZD6O60353 706 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 LRP3O75074 770 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 MPDU1O75352 247 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 ZBTB25P24278 435 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 WNT3P56703 355 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 ZNF683Q8IZ20 524 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 C5orf17Q8NAS9 161 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 FAM210BQ96KR6 192 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 TXLNGYQ9BZA5 131 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 CXXC4Q9H2H0 198 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 ADGRL4Q9HBW9 690 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 MSL2Q9HCI7 577 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 FLRT3Q9NZU0 649 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 LRP12Q9Y561 859 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 RREB1Q92766 1687 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 A0A1W2PPE3 182 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 SBK3P0C264 359 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 NOVP48745 357 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 LY6DQ14210 128 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 DCTN5Q9BTE1 182 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 ZFP64Q9NPA5 681 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 SPANXCQ9NY87 97 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 PRSS50Q9UI38 385 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 PSMB6P28072 239 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 FUT6P51993 359 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 TMEM241Q24JQ0 296 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 ADAMTS17Q8TE56 1095 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 ANKRD36A6QL64 1941 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 MFNGO00587 321 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 DHHO43323 396 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 SMPD2O60906 423 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 MGPP08493 103 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 CISD3P0C7P0 127 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 ATF1P18846 271 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 ACHEP22303 614 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 B4GALNT1Q00973 533 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms