RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SSX7Q7RTT5 188 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 CTXND1A0A1B0GTU2 59 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 HOXD4P09016 255 aaPredicted RBP10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 ETFRF1Q6IPR1 90 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 PUSL1Q8N0Z8 303 aaKnown RBP10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 ZNF519Q8TB69 540 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 RNF2Q99496 336 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 TMEM222Q9H0R3 208 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 PIN1P1O15428 100 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 PGA4P0DJD7 388 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 PGA5P0DJD9 388 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 DLK1P80370 383 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 PLPPR5Q32ZL2 321 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 ZNF260Q3ZCT1 412 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 TOMM20LQ6UXN7 152 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 SH2D2AQ9NP31 389 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 SLC36A1Q7Z2H8 476 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 OR13G1Q8NGZ3 307 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 TOX4O94842 621 aa10.36□□□□□ -0.75
CDC42BPA-202ENST00000366764 FAM24AA6NFZ4 105 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 RRP8O43159 456 aaKnown RBP10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 CRYAAP02489 173 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 COL9A1P20849 921 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 C1orf174Q8IYL3 243 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 TMEM52Q8NDY8 209 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 KCNK17Q96T54 332 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 FREM1Q5H8C1 2179 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 H0Y980 276 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 EML2O95834 649 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 CEACAM6P40199 344 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 TMEM267Q0VDI3 215 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 PMS2P11Q13670 270 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 LINC00518Q8N0U6 118 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 OR10X1Q8NGY0 326 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 YTHDF2Q9Y5A9 579 aaKnown RBP10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 ZNF106Q9H2Y7 1883 aaKnown RBP10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 J3QR89 54 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 TRAF3IP2O43734 574 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 ZIC2O95409 532 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 EWSR1Q01844 656 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 TMEM92Q6UXU6 159 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 C1QTNF6Q9BXI9 259 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 MRPL22Q9NWU5 206 aaKnown RBP10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 PRF1P14222 555 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 CCL7P80098 99 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 DTX4Q9Y2E6 619 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 IGHV1OR15-9A0A0B4J2B8 117 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 GPR37O15354 613 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 HYAL3O43820 417 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 ZADH2Q8N4Q0 377 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 NRTNQ99748 197 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 CRYM-AS1A6NIL9 109 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 POLR2GP62487 172 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 OR2H1Q9GZK4 316 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 PROCRQ9UNN8 238 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 ATRXP46100 2492 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 TSPAN2O60636 221 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 IL2RAP01589 272 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 DEFA4P12838 97 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 OR5A2Q8NGI9 324 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 OR10G4Q8NGN3 311 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 OR10G9Q8NGN4 311 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 OR10G7Q8NGN6 311 aa10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 MRPL24Q96A35 216 aaKnown RBP10.35□□□□□ -0.75
CDC42BPA-202ENST00000366764 C2CD4DB7Z1M9 353 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 OR10J4P0C629 311 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 SSPNQ14714 243 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 ADAT1Q9BUB4 502 aaKnown RBP10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 OR51M1Q9H341 326 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 GPR179Q6PRD1 2367 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 NUP210Q8TEM1 1887 aaPredicted RBP10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 A0A1W2PQF6 199 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 C11orf94C9JXX5 98 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 NGFP01138 241 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 RPEL1Q2QD12 228 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 P2RX4Q99571 388 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 FAM234AQ9H0X4 552 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 CLN5O75503 358 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 NDUFB7P17568 137 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 EPHA8P29322 1005 aaPredicted RBP10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 OR4S2Q8NH73 311 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 TMEM37Q8WXS4 190 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 IL22RA2Q969J5 263 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 HSD17B10Q99714 261 aaKnown RBP10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 OR5B3Q8NH48 314 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 LPAR6P43657 344 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 ASCL1P50553 236 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 GUCA2BQ16661 112 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 BSCL2Q96G97 398 aaPredicted RBP10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 SNX22Q96L94 193 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 GNRHR2Q96P88 292 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 LRRC3BQ96PB8 259 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 WNT16Q9UBV4 365 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 KCNE5Q9UJ90 142 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 AMDHD2Q9Y303 409 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 GEMIN2O14893 280 aaKnown RBP10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 RBM11P57052 281 aaKnown RBP10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 TMEM167BQ9NRX6 74 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 CHST1O43916 411 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms