RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 CETN3O15182 167 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 CALUO43852 315 aaPredicted RBP1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 CDK14O94921 469 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 YEATS4O95619 227 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 RAB36O95755 333 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 TRGV3P03979 118 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 RD3LP0DJH9 198 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 CGB3P0DN86 165 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 CGB7P0DN87 165 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 ZNF3P17036 446 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 ATF1P18846 271 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 CD34P28906 385 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 STC1P52823 247 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 RAB8AP61006 207 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 CASP8Q14790 479 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 LCE3AQ5TA76 89 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 NIPAL1Q6NVV3 410 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 BOD1L2Q8IYS8 172 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 MUC15Q8N387 334 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 MAL2Q969L2 176 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 TMEM56Q96MV1 263 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 EURLQ9NYK6 297 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 ICOSQ9Y6W8 199 aa1.94□□□□□ -2.1
RNU6-28P-201ENST00000362378 ZNF729A6NN14 1252 aaPredicted RBP1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 EFCAB9A8MZ26 197 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 TOX3O15405 576 aaPredicted RBP1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 FGF16O43320 207 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 PDYNP01213 254 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 IGKV1D-33P01593 117 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 IGKV1-33P01594 117 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 GABRA1P14867 456 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 TGFBR2P37173 567 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 FAM3AP98173 230 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 PAFAH1B3Q15102 231 aaKnown RBP1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 MMDQ15546 238 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 ZNHIT3Q15649 155 aaPredicted RBP1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 ZCWPW2Q504Y3 356 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 ELP2Q6IA86 826 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 Q6ZQT7 251 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 REEP6Q96HR9 211 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 B9D2Q9BPU9 175 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 FBXL15Q9H469 300 aa1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 METTL17Q9H7H0 456 aaPredicted RBP1.93□□□□□ -2.1
RNU6-28P-201ENST00000362378 RAD50Q92878 1312 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 THADAQ6YHU6 1953 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 PTPRKQ15262 1439 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 SSH2Q76I76 1423 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 F5H5K5 113 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 C15orf65H3BRN8 121 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 AQP9O43315 295 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 SOX14O95416 240 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 IGHV3-53P01767 116 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 HSPA13P48723 471 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 INPP1P49441 399 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 DLX6P56179 175 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 MP68P56378 58 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 MAP3K7CLP57077 242 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 EXOC3L4Q17RC7 722 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 PDZD11Q5EBL8 140 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 ZNF660Q6AZW8 331 aaPredicted RBP1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 LAIR2Q6ISS4 152 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 PAGE2Q7Z2X7 111 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 ADM2Q7Z4H4 148 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 FAM19A3Q7Z5A8 133 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 MTERF4Q7Z6M4 381 aaKnown RBP1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 CPNE9Q8IYJ1 553 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 LINC00304Q8N9R0 145 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 ATP6V1C2Q8NEY4 427 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 BPIFB6Q8NFQ5 453 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 ZNF721Q8TF20 911 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 CMBLQ96DG6 245 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 ZNF514Q96K75 400 aaPredicted RBP1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 RTBDNQ9BSG5 229 aaPredicted RBP1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 GABARAPL1Q9H0R8 117 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 WDR54Q9H977 334 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 BTRCQ9Y297 605 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 PUS1Q9Y606 427 aaKnown RBP eCLIP1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 R4GN34 69 aa1.92□□□□□ -2.1
RNU6-28P-201ENST00000362378 ZBED9Q6R2W3 1325 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 NID2Q14112 1375 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 OR5H14A6NHG9 310 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 GOLGA8RI6L899 631 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 CYTH3O43739 400 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 HRES1P13985 223 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 FOXA1P55317 472 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 KLF3P57682 345 aaPredicted RBP1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 SKP2Q13309 424 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 AMMECR1LQ6DCA0 310 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 KRTCAP2Q8N6L1 136 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 FER1L6-AS1Q8NA97 138 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 OR4P4Q8NGL7 312 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 APOBEC3DQ96AK3 386 aaPredicted RBP1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 OR2D2Q9H210 308 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 DUSP21Q9H596 190 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 DMAC2Q9NW81 257 aa1.91□□□□□ -2.1
RNU6-28P-201ENST00000362378 H3BMM0 161 aa1.9□□□□□ -2.11
RNU6-28P-201ENST00000362378 LIN7AO14910 233 aaPredicted RBP1.9□□□□□ -2.11
RNU6-28P-201ENST00000362378 PSIP1O75475 530 aaKnown RBP1.9□□□□□ -2.11
RNU6-28P-201ENST00000362378 CBR3O75828 277 aa1.9□□□□□ -2.11
RNU6-28P-201ENST00000362378 KLHL2O95198 593 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms