RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 BSXQ3C1V8 233 aa12.12□□□□□ -0.47
COL6A1-201ENST00000361866 FFAR4Q5NUL3 377 aa12.12□□□□□ -0.47
COL6A1-201ENST00000361866 CYB5R2Q6BCY4 276 aa12.12□□□□□ -0.47
COL6A1-201ENST00000361866 TOMM20LQ6UXN7 152 aa12.12□□□□□ -0.47
COL6A1-201ENST00000361866 D2HGDHQ8N465 521 aa12.12□□□□□ -0.47
COL6A1-201ENST00000361866 FLVCR1-AS1Q8TAF5 88 aa12.12□□□□□ -0.47
COL6A1-201ENST00000361866 ABHD3Q8WU67 409 aa12.12□□□□□ -0.47
COL6A1-201ENST00000361866 DMRTA2Q96SC8 542 aa12.12□□□□□ -0.47
COL6A1-201ENST00000361866 OR5H1A6NKK0 313 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 SYNGR2O43760 224 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 NXPH1P58417 271 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 RND3P61587 244 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 ETFRF1Q6IPR1 90 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 PAQR4Q8N4S7 273 aaPredicted RBP12.11□□□□□ -0.47
COL6A1-201ENST00000361866 OR2M3Q8NG83 312 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 VOPP1Q96AW1 172 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 NLRC5Q86WI3 1866 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 RAC1P63000 192 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 WDR25Q64LD2 544 aaPredicted RBP12.11□□□□□ -0.47
COL6A1-201ENST00000361866 RAB40CQ96S21 281 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 GPR87Q9BY21 358 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 KRTDAPP60985 99 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 PLAURQ03405 335 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 RNF144BQ7Z419 303 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 BIVMQ86UB2 503 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 DEFB108BQ8NET1 73 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 OR10AD1Q8NGE0 317 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 OIT3Q8WWZ8 545 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 FUT9Q9Y231 359 aa12.11□□□□□ -0.47
COL6A1-201ENST00000361866 CDS2O95674 445 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 SCTP09683 121 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 BCL3P20749 454 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 OR8G1Q15617 311 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 FAM78BQ5VT40 261 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 VPS25Q9BRG1 176 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 RTBDNQ9BSG5 229 aaPredicted RBP12.1□□□□□ -0.47
COL6A1-201ENST00000361866 RTL8AQ9BWD3 113 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 OCIAD1Q9NX40 245 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 PLA2G3Q9NZ20 509 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 MTCH1Q9NZJ7 389 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 IGHV3-43A0A0B4J1X8 118 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 CER1O95813 267 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 IGHV3-43DP0DP04 118 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 MAFAQ8NHW3 353 aaPredicted RBP12.1□□□□□ -0.47
COL6A1-201ENST00000361866 TRAPPC1Q9Y5R8 145 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 SH2D1BO14796 132 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 TRAF3IP2O43734 574 aaPredicted RBP12.1□□□□□ -0.47
COL6A1-201ENST00000361866 ZP4Q12836 540 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 IL24Q13007 206 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 CDCP2Q5VXM1 449 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 FAM58AQ8N1B3 248 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 SPEM1Q8N4L4 309 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 BTF3L4Q96K17 158 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 ATP5SQ99766 215 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 MYOZ1Q9NP98 299 aaPredicted RBP12.1□□□□□ -0.47
COL6A1-201ENST00000361866 A0A0J9YW62 118 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 CRYM-AS1A6NIL9 109 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 F6UZH7 168 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 SPINT2O43291 252 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 IGLV3-21P80748 117 aaPredicted RBP12.1□□□□□ -0.47
COL6A1-201ENST00000361866 ACER2Q5QJU3 275 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 APOBEC3DQ96AK3 386 aaPredicted RBP12.1□□□□□ -0.47
COL6A1-201ENST00000361866 KIAA1456Q9P272 454 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 PRSS50Q9UI38 385 aa12.1□□□□□ -0.47
COL6A1-201ENST00000361866 PGA5P0DJD9 388 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 PAX6P26367 422 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 OR10A7Q8NGE5 316 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 PINX1Q96BK5 328 aaKnown RBP12.09□□□□□ -0.47
COL6A1-201ENST00000361866 GGACTQ9BVM4 153 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 CXorf65A6NEN9 183 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 TRDCB7Z8K6 153 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 CLN5O75503 358 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 DANCRP0C864 163 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 PSG2P11465 335 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 CCL4P13236 92 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 IGFBP3P17936 291 aaPredicted RBP12.09□□□□□ -0.47
COL6A1-201ENST00000361866 DTYMKP23919 212 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 GNG3P63215 75 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 ZNF92Q03936 586 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 TBC1D28Q2M2D7 210 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 OR10G4Q8NGN3 311 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 OR10G9Q8NGN4 311 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 OR10G7Q8NGN6 311 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 MS4A10Q96PG2 267 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 RIMS4Q9H426 269 aaPredicted RBP12.09□□□□□ -0.47
COL6A1-201ENST00000361866 POLDIP2Q9Y2S7 368 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 FER1L5A0AVI2 2057 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 A0A1B0GV90 55 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 PQLC2LA1A4F0 135 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 ZNF501Q96CX3 271 aaPredicted RBP12.09□□□□□ -0.47
COL6A1-201ENST00000361866 WFIKKN1Q96NZ8 548 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 ZNF319Q9P2F9 582 aa12.09□□□□□ -0.47
COL6A1-201ENST00000361866 LRP5LA4QPB2 252 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 OR7C2O60412 319 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 CRYAAP02489 173 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 OPN1MWP04001 364 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 MELTFP08582 738 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 OPN1MW2P0DN77 364 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 OPN1MW3P0DN78 364 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 ACOT6Q3I5F7 207 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms