RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 MS4A10Q96PG2 267 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 ETHE1O95571 254 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 CHST5Q9GZS9 411 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 SCN7AQ01118 1682 aa8.57□□□□□ -1.04
CUX1-203ENST00000360264 UBE2L6O14933 153 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 INHBBP09529 407 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 SSX1Q16384 188 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 MYOZ3Q8TDC0 251 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 WDR89Q96FK6 387 aaPredicted RBP8.56□□□□□ -1.04
CUX1-203ENST00000360264 LSM6P62312 80 aaKnown RBP8.56□□□□□ -1.04
CUX1-203ENST00000360264 FAAP20Q6NZ36 180 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 ZNF343Q6P1L6 599 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 ASB10Q8WXI3 467 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 TSPAN32Q96QS1 320 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 RAB29O14966 203 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 FAM87AP0C7U9 286 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 G6PCP35575 357 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 GZMKP49863 264 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 GATCO43716 136 aaKnown RBP8.56□□□□□ -1.04
CUX1-203ENST00000360264 PPP1R1AQ13522 171 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 CTF1Q16619 201 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 NTMQ9P121 344 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 FAM74A7A6NL05 159 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 CCL21O00585 134 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 SPEM2Q0P670 501 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 NAT8Q9UHE5 227 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 A0A1W2PNV4 684 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 SMPD2O60906 423 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 COL8A1P27658 744 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 ZNF117Q03924 483 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 C17orf47Q8NEP4 570 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 OR2I1PQ8NGU4 316 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 TMEM171Q8WVE6 324 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 SLC52A3Q9NQ40 469 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 PCBP3P57721 371 aaKnown RBP8.56□□□□□ -1.04
CUX1-203ENST00000360264 C2CD4CQ8TF44 421 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 ASCL3Q9NQ33 180 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 EDIL3O43854 480 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 ORM2P19652 201 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 PSG5Q15238 335 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 TM4SF20Q53R12 229 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 NUDT8Q8WV74 236 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 ZNF665Q9H7R5 613 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 NHSQ6T4R5 1651 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 IGLV3-16A0A075B6K0 115 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 NQO2P16083 231 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 TBC1D26Q86UD7 250 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 FLYWCH2Q96CP2 140 aaKnown RBP8.56□□□□□ -1.04
CUX1-203ENST00000360264 MOB4Q9Y3A3 225 aa8.56□□□□□ -1.04
CUX1-203ENST00000360264 ZFPL1O95159 310 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 P2RY1P47900 373 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 MOGAT1Q96PD6 335 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 DUSP15Q9H1R2 295 aaPredicted RBP8.55□□□□□ -1.04
CUX1-203ENST00000360264 HMX2A2RU54 273 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 FAM157AC9JC47 383 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 M0R2Z0 102 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 SULT1A1P50225 295 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 AKIP1Q9NQ31 210 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 NPIPB6E9PJ23 425 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 OR5AC1P0C628 307 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 OR10G8Q8NGN5 311 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 OR2T10Q8NGZ9 312 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 GPX7Q96SL4 187 aaPredicted RBP8.55□□□□□ -1.04
CUX1-203ENST00000360264 TEX261Q6UWH6 196 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 OR2H1Q9GZK4 316 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 MLF1P58340 268 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 INO80CQ6PI98 192 aaPredicted RBP8.55□□□□□ -1.04
CUX1-203ENST00000360264 R3HDM4Q96D70 268 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 LINC00052Q96N35 136 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 NXF2Q9GZY0 626 aaKnown RBP8.55□□□□□ -1.04
CUX1-203ENST00000360264 SF3B6Q9Y3B4 125 aaKnown RBP8.55□□□□□ -1.04
CUX1-203ENST00000360264 TMEM88Q6PEY1 159 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 CCDC190Q86UF4 302 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 CALHM1Q8IU99 346 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 STARD4Q96DR4 205 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 SOX8P57073 446 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 SHISA5Q8N114 240 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 TMPRSS13Q9BYE2 586 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 INSIG2Q9Y5U4 225 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 DAOP14920 347 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 HYAL1Q12794 435 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 DHRS2Q13268 280 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 PMS2P11Q13670 270 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 NUP37Q8NFH4 326 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 RAB24Q969Q5 203 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 PLEKHB1Q9UF11 243 aaPredicted RBP8.55□□□□□ -1.04
CUX1-203ENST00000360264 CD81P60033 236 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 HIGD1AQ9Y241 93 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 COX7A1P24310 79 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 DEFB124Q8NES8 71 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 ZNF768Q9H5H4 540 aaKnown RBP8.55□□□□□ -1.04
CUX1-203ENST00000360264 PLSCR3Q9NRY6 295 aa8.55□□□□□ -1.04
CUX1-203ENST00000360264 OR4A5Q8NH83 315 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 WDR34Q96EX3 536 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 MIOXQ9UGB7 285 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 DLL1O00548 723 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 ERVFRD-1P60508 538 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 GABRA6Q16445 453 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 HLA-DRB5Q30154 266 aa8.54□□□□□ -1.04
CUX1-203ENST00000360264 CLLU1Q5K131 121 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms